RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 VSTM2BA6NLU5 285 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 A8MUI8 341 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 H3BMH7 237 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 DFFAO00273 331 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 ZNHIT1O43257 154 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 DAPK3O43293 454 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 POP7O75817 140 aaKnown RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 YEATS4O95619 227 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 SP1P08047 785 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 CYP11B1P15538 503 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 CA4P22748 312 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 PTPN9P43378 593 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 AIF1P55008 147 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 BPIFB4P59827 614 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 TPI1P60174 286 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 RPL26P61254 145 aaKnown RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 SLC10A7Q0GE19 358 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 SNTB1Q13884 538 aaKnown RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 OR1C1Q15619 314 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 C15orf59Q2T9L4 293 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 CCDC14Q49A88 953 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 ACER2Q5QJU3 275 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF648Q5T619 568 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 YOD1Q5VVQ6 348 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 HIST2H2BDQ6DRA6 164 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 SLC25A25Q6KCM7 469 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 SCYL2Q6P3W7 929 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 PAOXQ6QHF9 649 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 NEK10Q6ZWH5 1172 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 NLRP9Q7RTR0 991 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 GALNTL5Q7Z4T8 443 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 FGD2Q7Z6J4 655 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 KIF18BQ86Y91 864 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 SLC13A5Q86YT5 568 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF547Q8IVP9 402 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 TMEM151BQ8IW70 566 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 PYROXD2Q8N2H3 581 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 TRAM1L1Q8N609 369 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 CCDC185Q8N715 623 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 PPM1NQ8N819 430 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 C19orf47Q8N9M1 422 aaKnown RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 POGLUT1Q8NBL1 392 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 ACVR1CQ8NER5 493 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 RXFP2Q8WXD0 754 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 CENPIQ92674 756 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 MIEF2Q96C03 454 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 C8orf44Q96CB5 159 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 SCMH1Q96GD3 660 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 C12orf66Q96MD2 445 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 LYSMD1Q96S90 227 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 MGME1Q9BQP7 344 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 TUBGCP2Q9BSJ2 902 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 CNPY3Q9BT09 278 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 C12orf49Q9H741 205 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 YAE1D1Q9NRH1 226 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 FRRS1LQ9P0K9 344 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 B4GALT7Q9UBV7 327 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 ACSL5Q9ULC5 683 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 RPL26L1Q9UNX3 145 aaKnown RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 TRIM33Q9UPN9 1127 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 PLCL2Q9UPR0 1127 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 NCOA6Q14686 2063 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-245ENST00000556958 SEC16AO15027 2179 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 CLCA1A8K7I4 914 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 TFECO14948 347 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-245ENST00000556958 PDHA1P08559 390 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 ITGAMP11215 1152 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 COX6A1P12074 109 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 DESP17661 470 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 FPR1P21462 350 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 CDC25BP30305 580 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 PTGER1P34995 402 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 CD96P40200 585 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 EMP2P54851 167 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 OC90Q02509 493 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-245ENST00000556958 KLC1Q07866 573 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 TMEM115Q12893 351 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-245ENST00000556958 TUBA3CQ13748 450 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 MAPKAPK3Q16644 382 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 TSNAXIP1Q2TAA8 658 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 FAM214AQ32MH5 1076 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 ATP13A4Q4VNC1 1196 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 C10orf62Q5T681 223 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-245ENST00000556958 MARC1Q5VT66 337 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 LIPNQ5VXI9 398 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 METRNLQ641Q3 311 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 KAZNQ674X7 775 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 SPINK14Q6IE38 97 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 TRNP1Q6NT89 227 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 TUBA3EQ6PEY2 450 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 KDELC1Q6UW63 502 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 B3GNT6Q6ZMB0 384 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 C20orf204Q6ZNR8 217 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 WDR53Q7Z5U6 358 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-245ENST00000556958 EMC1Q8N766 993 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 MDS2Q8NDY4 140 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 GDAP1Q8TB36 358 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 FAM172AQ8WUF8 416 aa5.45□□□□□ -1.54
ATXN3-245ENST00000556958 RNASE6Q93091 150 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms