RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TTLL9Q3SXZ7 439 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 PLK5Q496M5 336 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 TRIM61Q5EBN2 209 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 CTSL3PQ5NE16 218 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 C1QL3Q5VWW1 255 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 MACC1Q6ZN28 852 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 CXXC5Q7LFL8 322 aaKnown RBP6.68□□□□□ -1.34
SLIRP-204ENST00000555890 DSG4Q86SJ6 1040 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 TTC7BQ86TV6 843 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 TSPAN33Q86UF1 283 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF227Q86WZ6 799 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 ZSWIM9Q86XI8 627 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 HID1Q8IV36 788 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 FBXO39Q8N4B4 442 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 SIDT2Q8NBJ9 832 aaKnown RBP6.68□□□□□ -1.34
SLIRP-204ENST00000555890 GPR26Q8NDV2 337 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 TMIEQ8NEW7 156 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 DTX3LQ8TDB6 740 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 SORCS1Q8WY21 1168 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 OR8D1Q8WZ84 308 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 PMM1Q92871 262 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 PPP1R14AQ96A00 147 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 ELSPBP1Q96BH3 223 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 FAM136AQ96C01 138 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 EID2BQ96D98 161 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 KLHDC7BQ96G42 594 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 PDLIM5Q96HC4 596 aaKnown RBP6.68□□□□□ -1.34
SLIRP-204ENST00000555890 TMEM237Q96Q45 408 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 PANX3Q96QZ0 392 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 COPS8Q99627 209 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 FAM83CQ9BQN1 747 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 CCDC28BQ9BUN5 200 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 ERVK-6Q9BXR3 956 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 KLHL25Q9H0H3 589 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 DUSP15Q9H1R2 295 aaPredicted RBP6.68□□□□□ -1.34
SLIRP-204ENST00000555890 LRMDAQ9H2I8 198 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 FAM83DQ9H4H8 585 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 CYP4F12Q9HCS2 524 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 SARS2Q9NP81 518 aaKnown RBP6.68□□□□□ -1.34
SLIRP-204ENST00000555890 MRGBPQ9NV56 204 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.68□□□□□ -1.34
SLIRP-204ENST00000555890 GTSE1Q9NYZ3 720 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 B4GALT6Q9UBX8 382 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 SUN2Q9UH99 717 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 TAGLN3Q9UI15 199 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 LNPEPQ9UIQ6 1025 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 DHRS7Q9Y394 339 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 PIKFYVEQ9Y2I7 2098 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 KNTC1P50748 2209 aa6.68□□□□□ -1.34
SLIRP-204ENST00000555890 A0A0U1RQS6 177 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 LOC100289279A0A1B0GTE1 492 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 TBC1D3BA6NDS4 549 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 NEMP2A6NFY4 417 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 C16orf96A6NNT2 1141 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 AGAP14A8MT82 685 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SUPT3HB4E1H0 165 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SPECC1L-ADORA2AF8WAN1 911 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 STX16-NPEPL1H3BU86 382 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 GAPDHSO14556 408 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF195O14628 629 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 STX16O14662 325 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 KPNA5O15131 536 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PRODHO43272 600 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 GRID2O43424 1007 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 TLX3O43711 291 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SUPT3HO75486 399 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SLC25A14O95258 325 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 C1SP09871 688 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 OR56A5P0C7T3 313 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 CBSLP0DN79 551 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 T-ENOLP0DO92 83 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PSMC3P17980 439 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 UGT1A6P19224 532 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 NCF2P19878 526 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 UGT1A1P22309 533 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 UGT1A4P22310 534 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 LHCGRP22888 699 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 UGT1A3P35503 534 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 UGT1A5P35504 534 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 CBSP35520 551 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 EIF2DP41214 584 aaKnown RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 KCNC1P48547 511 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SPINT3P49223 89 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 CLCN7P51798 805 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ID3Q02535 119 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 KDSRQ06136 332 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 FCHO2Q0JRZ9 810 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ELP6Q0PNE2 266 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 TUBB3Q13509 450 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 RUNX3Q13761 415 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 OR4D1Q15615 310 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 PFKFB4Q16877 469 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF284Q2VY69 593 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 HSF5Q4G112 596 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SETMARQ53H47 684 aaPredicted RBP6.67□□□□□ -1.34
SLIRP-204ENST00000555890 UNC50Q53HI1 259 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 SH2D4BQ5SQS7 431 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF678Q5SXM1 525 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ARHGAP40Q5TG30 622 aa6.67□□□□□ -1.34
SLIRP-204ENST00000555890 ANKS6Q68DC2 871 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms