RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LINC01555Q8NAE3 123 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 MNS1Q8NEH6 495 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 GABPB2Q8TAK5 448 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 PROKR1Q8TCW9 393 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 SLCO2A1Q92959 643 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 ZNF669Q96BR6 464 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 IL17FQ96PD4 163 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 RUFY1Q96T51 708 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 DHRS4Q9BTZ2 278 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 SPRTNQ9H040 489 aaPredicted RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 CCDC68Q9H2F9 335 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 TXLNGQ9NUQ3 528 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 SPATA7Q9P0W8 599 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 ASIC3Q9UHC3 531 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 ANAPC2Q9UJX6 822 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 TCFL5Q9UL49 500 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 SNX7Q9UNH6 387 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 SRPK3Q9UPE1 567 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 PADI2Q9Y2J8 665 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 NFS1Q9Y697 457 aa8.4□□□□□ -1.06
ACTN1-213ENST00000554508 TNRC6AQ8NDV7 1962 aaKnown RBP8.4□□□□□ -1.06
ACTN1-213ENST00000554508 NUP210LQ5VU65 1888 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 DNALI1O14645 258 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 ZSCAN9O15535 394 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 TTI1O43156 1089 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 SRPX2O60687 465 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 TTC4O95801 387 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 MPC1LP0DKB6 136 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 CBSLP0DN79 551 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 MAGP20916 626 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 CBSP35520 551 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 HSD17B2P37059 387 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 ARSFP54793 590 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 DCDP81605 110 aaKnown RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 MRPS25P82663 173 aaKnown RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 PTK6Q13882 451 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 NAA25Q14CX7 972 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 NCF4Q15080 339 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 CYP2A13Q16696 494 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 KLHL38Q2WGJ6 581 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 LACTB2Q53H82 288 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 TCTE1Q5JU00 501 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 RNASEH2BQ5TBB1 312 aaKnown RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 YOD1Q5VVQ6 348 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 ZNF385CQ66K41 422 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 FCRL6Q6DN72 434 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 ZNF470Q6ECI4 717 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 LCN10Q6JVE6 187 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 FAM198BQ6UWH4 519 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 SYDE1Q6ZW31 735 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 ZNF572Q7Z3I7 529 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 PTRH1Q86Y79 214 aaKnown RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 RAB43Q86YS6 212 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 MCATQ8IVS2 390 aaKnown RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 C2orf73Q8N5S3 287 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 LMNTD1Q8N9Z9 388 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 OR9A1PQ8NGU1 263 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 ADAMTS17Q8TE56 1095 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 DLG3Q92796 817 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 IP6K3Q96PC2 410 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 TRIM51Q9BSJ1 452 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 NAT9Q9BTE0 207 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 NDC1Q9BTX1 674 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 TRIM31Q9BZY9 425 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 ENAMQ9NRM1 1142 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 FAM114A2Q9NRY5 505 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 C20orf96Q9NUD7 363 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 IRAK4Q9NWZ3 460 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 EURLQ9NYK6 297 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 GPN3Q9UHW5 284 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-213ENST00000554508 TLK1Q9UKI8 766 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 KLK4Q9Y5K2 254 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 MAD1L1Q9Y6D9 718 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 FAM169AQ9Y6X4 670 aa8.39□□□□□ -1.07
ACTN1-213ENST00000554508 DOCK10Q96BY6 2186 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 CTAGE15A4D2H0 777 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 ZNF839A8K0R7 811 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 SMAPO00193 183 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 EIF3FO00303 357 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-213ENST00000554508 HCRTR1O43613 425 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 PSIP1O75475 530 aaKnown RBP8.38□□□□□ -1.07
ACTN1-213ENST00000554508 WISP1O95388 367 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 CATP04040 527 aaKnown RBP8.38□□□□□ -1.07
ACTN1-213ENST00000554508 CTAGE8P0CG41 777 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 ERGP11308 486 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 PIM1P11309 404 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-213ENST00000554508 ENO3P13929 434 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-213ENST00000554508 PGAM1P18669 254 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 BDKRB1P46663 353 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 CLCN7P51798 805 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 NFKB2Q00653 900 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 KCNC4Q03721 635 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 KLRB1Q12918 225 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 CTBP1Q13363 440 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 IL10RAQ13651 578 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 SSPNQ14714 243 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 ARHGAP19Q14CB8 494 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 DEFB110Q30KQ9 67 aa8.38□□□□□ -1.07
ACTN1-213ENST00000554508 PTCHD3Q3KNS1 767 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms