RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ARHGAP45Q92619 1136 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 PTERQ96BW5 349 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 SPDL1Q96EA4 605 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 LRRC3BQ96PB8 259 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 USP28Q96RU2 1077 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 ATOH8Q96SQ7 321 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 URM1Q9BTM9 101 aaKnown RBP2.85□□□□□ -1.95
VRK1-202ENST00000553683 OR2B2Q9GZK3 357 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 NOL11Q9H8H0 719 aaKnown RBP2.85□□□□□ -1.95
VRK1-202ENST00000553683 P4HTMQ9NXG6 502 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 CPSF2Q9P2I0 782 aaKnown RBP2.85□□□□□ -1.95
VRK1-202ENST00000553683 CHORDC1Q9UHD1 332 aaPredicted RBP2.85□□□□□ -1.95
VRK1-202ENST00000553683 DAPK2Q9UIK4 370 aa2.85□□□□□ -1.95
VRK1-202ENST00000553683 FBXO2Q9UK22 296 aaPredicted RBP2.85□□□□□ -1.95
VRK1-202ENST00000553683 MYH14Q7Z406 1995 aaKnown RBP2.84□□□□□ -1.95
VRK1-202ENST00000553683 C15orf61A6NNL5 157 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 ERI2A8K979 691 aaKnown RBP2.84□□□□□ -1.95
VRK1-202ENST00000553683 H0YAE9 185 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 EPHB6O15197 1021 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 GFPT2O94808 682 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 C22orf31O95567 290 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 ABCB1P08183 1280 aaPredicted RBP2.84□□□□□ -1.95
VRK1-202ENST00000553683 CDH3P22223 829 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 UGT1A4P22310 534 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 CSTF2P33240 577 aaKnown RBP eCLIP2.84□□□□□ -1.95
VRK1-202ENST00000553683 LIMK1P53667 647 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 HNRNPDQ14103 355 aaKnown RBP2.84□□□□□ -1.95
VRK1-202ENST00000553683 UGT3A2Q3SY77 523 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 KLHL26Q53HC5 615 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 LCN1P1Q5VSP4 162 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 MFSD12Q6NUT3 480 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 CFAP161Q6P656 301 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 SLC25A47Q6Q0C1 308 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 ZNF595Q8IYB9 648 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 EID3Q8N140 333 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 AVL9Q8NBF6 648 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 PRSS33Q8NF86 280 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 GATAD1Q8WUU5 269 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 GTF3AQ92664 365 aaKnown RBP2.84□□□□□ -1.95
VRK1-202ENST00000553683 SLCO2A1Q92959 643 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 C10orf90Q96M02 699 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 DGAT2Q96PD7 388 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 GCNAQ96QF7 691 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 CDK19Q9BWU1 502 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 Q9N2K0 584 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 CHST11Q9NPF2 352 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 PRMT7Q9NVM4 692 aaPredicted RBP2.84□□□□□ -1.95
VRK1-202ENST00000553683 PCDHGB4Q9UN71 923 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 STUB1Q9UNE7 303 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 PADI2Q9Y2J8 665 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 PCNX3Q9H6A9 2034 aa2.84□□□□□ -1.95
VRK1-202ENST00000553683 TDRD15B5MCY1 1934 aaKnown RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 A8MV72 311 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 E9PQ18 207 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 PTGESO14684 152 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 MEIS2O14770 477 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 SAGP10523 405 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 HAPLN1P10915 354 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 SP100P23497 879 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 HLA-FP30511 346 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 LEPRP48357 1165 aaKnown RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 PAX9P55771 341 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 PSMC6P62333 389 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 SP3Q02447 781 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 TAF10Q12962 218 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 PHKG1Q16816 387 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 FASTKD1Q53R41 847 aaKnown RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 WDR78Q5VTH9 848 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 TMPRSS11BQ86T26 416 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 LRRTM1Q86UE6 522 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 HOGA1Q86XE5 327 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 THAP8Q8NA92 274 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 POMGNT2Q8NAT1 580 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 OR11H4Q8NGC9 324 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 OR1L3Q8NH93 324 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 MAPK15Q8TD08 544 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 ZFAND2BQ8WV99 257 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 AZIN2Q96A70 460 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 ANKRD9Q96BM1 317 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 MOB3AQ96BX8 217 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 ZNF830Q96NB3 372 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 NKX3-1Q99801 234 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 CABLES2Q9BTV7 478 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 GPR88Q9GZN0 384 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 TBC1D17Q9HA65 648 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 FAM207AQ9NSI2 230 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 MAN2C1Q9NTJ4 1040 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 OLAHQ9NV23 265 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 HAO2Q9NYQ3 351 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 PAK5Q9P286 719 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 EPHA6Q9UF33 1036 aa2.83□□□□□ -1.96
VRK1-202ENST00000553683 C19orf25Q9UFG5 118 aaPredicted RBP2.83□□□□□ -1.96
VRK1-202ENST00000553683 A0A1B0GVY2 172 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 hCG_1809904A0A1W2PP81 198 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 A0A1W2PPE2 198 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 A0A1W2PR64 198 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 MPTX1A8MV57 137 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 ARPC2O15144 300 aa2.82□□□□□ -1.96
VRK1-202ENST00000553683 SORBS2O94875 1100 aaKnown RBP2.82□□□□□ -1.96
VRK1-202ENST00000553683 SEC24AO95486 1093 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms