RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 NAT2P11245 290 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CD1DP15813 335 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CREB1P16220 341 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF37AP17032 561 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TFEBP19484 476 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CYP2A7P20853 494 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CD247P20963 164 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 IDSP22304 550 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 VAMP1P23763 118 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ATP5F1P24539 256 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 GRK2P25098 689 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CD27P26842 260 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 AOAHP28039 575 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 MAT2AP31153 395 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 SERPINB5P36952 375 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ABCG1P45844 678 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PRLHRP49683 370 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CSRP3P50461 194 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CDKN2DP55273 166 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CDK3Q00526 305 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 RPA4Q13156 261 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 IRF4Q15306 451 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 SYTL3Q4VX76 610 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CTSL3PQ5NE16 218 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 SEL1L3Q68CR1 1132 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PAQR3Q6TCH7 311 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ENPP7Q6UWV6 458 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 RFLNAQ6ZTI6 216 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 MICALCLQ6ZW33 695 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 FRA10AC1Q70Z53 315 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 LPCAT2Q7L5N7 544 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 BMP8AQ7Z5Y6 402 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CLEC14AQ86T13 490 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ADAMTSL2Q86TH1 951 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 IQCHQ86VS3 1027 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 WDR5BQ86VZ2 330 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 AMZ2Q86W34 360 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 LONP2Q86WA8 852 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 HEATR4Q86WZ0 1026 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 GPSM1Q86YR5 675 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TRAPPC5Q8IUR0 188 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 C1orf210Q8IVY1 113 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CEP97Q8IW35 865 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 FSTL5Q8N475 847 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CLDN19Q8N6F1 224 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 RASGEF1AQ8N9B8 481 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 SIDT2Q8NBJ9 832 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 OR2L2Q8NH16 312 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 HM13Q8TCT9 377 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 MGARPQ8TDB4 240 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 LRRC8CQ8TDW0 803 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PPP4R1Q8TF05 950 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 EEF1AKMT1Q8WVE0 214 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 KCTD4Q8WVF5 259 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CKAP2Q8WWK9 683 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 KLK6Q92876 244 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 GRAMD1AQ96CP6 724 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 COX14Q96I36 57 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 WDR92Q96MX6 357 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 JMJD8Q96S16 334 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 OLFM1Q99784 485 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 BOCQ9BWV1 1114 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TPSD1Q9BZJ3 242 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 NSRP1Q9H0G5 558 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 OR2AG1Q9H205 316 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 DPEP2Q9H4A9 486 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CCDC134Q9H6E4 229 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 RDH14Q9HBH5 336 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 EML4Q9HC35 981 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TNFRSF12AQ9NP84 129 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 MBNL1Q9NR56 388 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PSD3Q9NYI0 1048 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TMEM216Q9P0N5 145 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 SLC17A6Q9P2U8 582 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ATXN10Q9UBB4 475 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 COPG2Q9UBF2 871 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ZNHIT2Q9UHR6 403 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 MOSPD1Q9UJG1 213 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 FBXO4Q9UKT5 387 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TMPRSS11EQ9UL52 423 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ACSL5Q9ULC5 683 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TNPO3Q9Y5L0 923 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PRSS21Q9Y6M0 314 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CEP192Q8TEP8 1941 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 GMNCA6NCL1 334 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 OR5K4A6NMS3 321 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF839A8K0R7 811 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 IQCF5A8MTL0 148 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 MEI4A8MW99 385 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 FOXO6A8MYZ6 492 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 KLF11O14901 512 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 MTX2O75431 263 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 GPC4O75487 556 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 IPO13O94829 963 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SLCO2B1O94956 709 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 RECKO95980 971 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 SOD1P00441 154 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 CATP04040 527 aaKnown RBP4.89□□□□□ -1.63
VTI1B-202ENST00000553619 BPGMP07738 259 aa4.89□□□□□ -1.63
VTI1B-202ENST00000553619 ANXA5P08758 320 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms