RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 GPN2Q9H9Y4 310 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-218ENST00000552839 SLC23A2Q9UGH3 650 aa11.06□□□□□ -0.64
TMEM116-218ENST00000552839 FETUBQ9UGM5 382 aa11.06□□□□□ -0.64
TMEM116-218ENST00000552839 ZNF180Q9UJW8 692 aa11.06□□□□□ -0.64
TMEM116-218ENST00000552839 ASF1AQ9Y294 204 aa11.06□□□□□ -0.64
TMEM116-218ENST00000552839 MTO1Q9Y2Z2 717 aaKnown RBP11.06□□□□□ -0.64
TMEM116-218ENST00000552839 PCYT1BQ9Y5K3 369 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-218ENST00000552839 ST14Q9Y5Y6 855 aa11.06□□□□□ -0.64
TMEM116-218ENST00000552839 COLEC10Q9Y6Z7 277 aa11.06□□□□□ -0.64
TMEM116-218ENST00000552839 USP9YO00507 2555 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 IGHV1OR21-1A0A087WYE8 117 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 A0A087X1B8 175 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 PRR19A6NJB7 356 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 B4E171 279 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 PHGDHO43175 533 aaKnown RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 SGTAO43765 313 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 MT-ND3P03897 115 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 CATP04040 527 aaKnown RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 SHBGP04278 402 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 NR1D1P20393 614 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 NDUFS1P28331 727 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 TSPAN7P41732 249 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 KPNA2P52292 529 aaKnown RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 MLLT10P55197 1068 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 CDKN2DP55273 166 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 TAS2R39P59534 338 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 ABRQ12979 859 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 SQSTM1Q13501 440 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 ZNF460Q14592 562 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 DEFB109BQ30KR1 87 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 LACTB2Q53H82 288 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 CEP85LQ5SZL2 805 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 METRNLQ641Q3 311 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 KLC3Q6P597 504 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 HDXQ7Z353 690 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 TIPARPQ7Z3E1 657 aaKnown RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 CMC1Q7Z7K0 106 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 FAM129CQ86XR2 697 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 NLGN4XQ8N0W4 816 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 BMPERQ8N8U9 685 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 NLGN4YQ8NFZ3 816 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 CD200R1Q8TD46 325 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 MAGEC3Q8TD91 643 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 DCAKDQ8WVC6 231 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 SH3KBP1Q96B97 665 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 CABS1Q96KC9 395 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 RMDN2Q96LZ7 410 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 FERD3LQ96RJ6 166 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 IQCGQ9H095 443 aaKnown RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 STMN4Q9H169 189 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 TRIT1Q9H3H1 467 aaKnown RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 POPDC3Q9HBV1 291 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 SNX15Q9NRS6 342 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 KLHL42Q9P2K6 505 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 PLEKHB1Q9UF11 243 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 TBC1D29Q9UFV1 150 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 TP53TG5Q9Y2B4 290 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 TDRKHQ9Y2W6 561 aaKnown RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 DHRS7Q9Y394 339 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 CFAP20Q9Y6A4 193 aaKnown RBP11.05□□□□□ -0.64
TMEM116-218ENST00000552839 LRRK2Q5S007 2527 aa11.05□□□□□ -0.64
TMEM116-218ENST00000552839 SLC5A10A0PJK1 596 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 OR52A4PA6NMU1 304 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 K7EM74 188 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 EIF3FO00303 357 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 RGS16O15492 202 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 SYF2O95926 243 aaKnown RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 S100BP04271 92 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 MTHFD1P11586 935 aaKnown RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 CYP2A7P20853 494 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 CLCN7P51798 805 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 RAB15P59190 212 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 HHEXQ03014 270 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 KLRB1Q12918 225 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 BEND6Q5SZJ8 279 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 ATP1A1-AS1Q5TC04 95 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 AGAP9Q5VTM2 703 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 C16orf46Q6P387 395 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 TMEM71Q6P5X7 295 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 FBXO38Q6PIJ6 1188 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 PAQR3Q6TCH7 311 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 PIWIL4Q7Z3Z4 852 aaKnown RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 CCDC91Q7Z6B0 441 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 SLC22A15Q8IZD6 547 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 LILRA3Q8N6C8 439 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 SLC37A2Q8TED4 501 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 TFGQ92734 400 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 KIAA1143Q96AT1 154 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 AHCYL2Q96HN2 611 aaKnown RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 SCYL1Q96KG9 808 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 SLC38A3Q99624 504 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 OLFM1Q99784 485 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 DPYSL5Q9BPU6 564 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 HGH1Q9BTY7 390 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 TRIM54Q9BYV2 358 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 EPB41L4BQ9H329 900 aa11.04□□□□□ -0.64
TMEM116-218ENST00000552839 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-218ENST00000552839 POT1Q9NUX5 634 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms