RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ADGRE2Q9UHX3 823 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 EDARQ9UNE0 448 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 FAM215AQ9Y5M1 114 aa12.75□□□□□ -0.37
SNRPF-203ENST00000551316 CDC40O60508 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRPF-203ENST00000551316 PIM1P11309 404 aaPredicted RBP12.74□□□□□ -0.37
SNRPF-203ENST00000551316 TACR1P25103 407 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 STIM1Q13586 685 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 BECN1Q14457 450 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 CLEC16AQ2KHT3 1053 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 ACER2Q5QJU3 275 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 C10orf62Q5T681 223 aaPredicted RBP12.74□□□□□ -0.37
SNRPF-203ENST00000551316 KDELC1Q6UW63 502 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 FAM151BQ6UXP7 276 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 UNC5AQ6ZN44 842 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 NT5DC3Q86UY8 548 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 PHF13Q86YI8 300 aaPredicted RBP12.74□□□□□ -0.37
SNRPF-203ENST00000551316 NSMCE1Q8WV22 266 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRPF-203ENST00000551316 TTC25Q96NG3 672 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 GPR63Q9BZJ6 419 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 OR52A5Q9H2C5 316 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 RBM22Q9NW64 420 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRPF-203ENST00000551316 TAS2R14Q9NYV8 317 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 PLAGL1Q9UM63 463 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 COLEC10Q9Y6Z7 277 aa12.74□□□□□ -0.37
SNRPF-203ENST00000551316 KMT2CQ8NEZ4 4911 aaKnown RBP12.73□□□□□ -0.37
SNRPF-203ENST00000551316 LOC102723996A0A087X1L8 192 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
SNRPF-203ENST00000551316 SEC24DO94855 1032 aaPredicted RBP12.73□□□□□ -0.37
SNRPF-203ENST00000551316 CHRM5P08912 532 aaPredicted RBP12.73□□□□□ -0.37
SNRPF-203ENST00000551316 PDHA2P29803 388 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 PRKCIP41743 596 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 GRIA3P42263 894 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 NSFP46459 744 aaKnown RBP12.73□□□□□ -0.37
SNRPF-203ENST00000551316 HCAR3P49019 387 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 ZNF658BQ4V348 819 aaPredicted RBP12.73□□□□□ -0.37
SNRPF-203ENST00000551316 KLHDC7AQ5VTJ3 777 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 RTL6Q6ICC9 239 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 POLNQ7Z5Q5 900 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 P3H2Q8IVL5 708 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 RELL2Q8NC24 303 aaPredicted RBP12.73□□□□□ -0.37
SNRPF-203ENST00000551316 VPS50Q96JG6 964 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
SNRPF-203ENST00000551316 ZNF700Q9H0M5 742 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 NLRC4Q9NPP4 1024 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 PNPLA3Q9NST1 481 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 ACSL5Q9ULC5 683 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 MKL2Q9ULH7 1088 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 USF3Q68DE3 2245 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 TRRAPQ9Y4A5 3859 aa12.73□□□□□ -0.37
SNRPF-203ENST00000551316 IGLV3-12A0A075B6K2 115 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 BUD23O43709 281 aaKnown RBP12.72□□□□□ -0.37
SNRPF-203ENST00000551316 HS6ST1O60243 411 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 SP1P08047 785 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 GLI4P10075 376 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 TFEBP19484 476 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 PSMA2P25787 234 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 UQCRC1P31930 480 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 ARSFP54793 590 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 BOP1Q14137 746 aaKnown RBP12.72□□□□□ -0.37
SNRPF-203ENST00000551316 KAZNQ674X7 775 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 LANCL3Q6ZV70 420 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 WDR53Q7Z5U6 358 aaPredicted RBP12.72□□□□□ -0.37
SNRPF-203ENST00000551316 CFAP206Q8IYR0 622 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 MAPK1IP1LQ8NDC0 245 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 MYRIPQ8NFW9 859 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 OR5M3Q8NGP4 307 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 OR5AR1Q8NGP9 310 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 SH3GL2Q99962 352 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 BDH2Q9BUT1 245 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 C19orf24Q9BVV8 132 aa12.72□□□□□ -0.37
SNRPF-203ENST00000551316 DNMT3AQ9Y6K1 912 aaPredicted RBP12.72□□□□□ -0.37
SNRPF-203ENST00000551316 BICDL2A1A5D9 508 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 BIN1O00499 593 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 ARHGEF9O43307 516 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 NME2P1O60361 137 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 PDE9AO76083 593 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 CALB1P05937 261 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 UCHL3P15374 230 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 NME2P22392 152 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 CA4P22748 312 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 EMP2P54851 167 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 SNRPNP63162 240 aaKnown RBP12.71□□□□□ -0.37
SNRPF-203ENST00000551316 ZBTB17Q13105 803 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 PTPRCAPQ14761 206 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 DAZAP2Q15038 168 aaPredicted RBP12.71□□□□□ -0.37
SNRPF-203ENST00000551316 H3F3CQ6NXT2 135 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 HOOK3Q86VS8 718 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 CNTD1Q8N815 330 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 TMEM178AQ8NBL3 297 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 OR5M9Q8NGP3 310 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 OR10Q1Q8NGQ4 319 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 FAM222BQ8WU58 562 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 C10orf90Q96M02 699 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 ZNF285Q96NJ3 590 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 CEP41Q9BYV8 373 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 SYNPO2LQ9H987 977 aa12.71□□□□□ -0.37
SNRPF-203ENST00000551316 MAGEE1Q9HCI5 957 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms