RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 RNASEH2BQ5TBB1 312 aaKnown RBP3.37□□□□□ -1.87
CCDC38-204ENST00000546816 KRT79Q5XKE5 535 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 KBTBD6Q86V97 674 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 NUDT13Q86X67 352 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 PTPMT1Q8WUK0 201 aaPredicted RBP3.37□□□□□ -1.87
CCDC38-204ENST00000546816 GATAD1Q8WUU5 269 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 RASL10AQ92737 203 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 NAP1L4Q99733 375 aaKnown RBP3.37□□□□□ -1.87
CCDC38-204ENST00000546816 RAB11FIP5Q9BXF6 653 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 MMP27Q9H306 513 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 MUTYHQ9UIF7 546 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 TNNQ9UQP3 1299 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 TRIM17Q9Y577 477 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 DOK2O60496 412 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 TSPAN1O60635 241 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 TOMM70O94826 608 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 IGHV3-13P01766 116 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 SMIM18P0DKX4 95 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 JAK1P23458 1154 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 PTPN3P26045 913 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 MNDAP41218 407 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 SLC9A3P48764 834 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 MAT1AQ00266 395 aaKnown RBP3.36□□□□□ -1.87
CCDC38-204ENST00000546816 MTF1Q14872 753 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 DUSP28Q4G0W2 176 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 SYT14P1Q58G82 188 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 PLEKHS1Q5SXH7 462 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 TMPRSS11BQ86T26 416 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 AFAP1Q8N556 730 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 C17orf47Q8NEP4 570 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 GPRC5AQ8NFJ5 357 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 OR2L2Q8NH16 312 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 KIFC3Q9BVG8 833 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 OSGEPL1Q9H4B0 414 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 ZHX3Q9H4I2 956 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 PSD3Q9NYI0 1048 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 STUB1Q9UNE7 303 aa3.36□□□□□ -1.87
CCDC38-204ENST00000546816 LOC102723996A0A087X1L8 192 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 A0A1W2PQ09 198 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 C2orf81A6NN90 581 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 EPHB6O15197 1021 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 BCL10O95999 233 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 SLC2A2P11168 524 aaPredicted RBP3.35□□□□□ -1.87
CCDC38-204ENST00000546816 DARSP14868 501 aaKnown RBP3.35□□□□□ -1.87
CCDC38-204ENST00000546816 TMEM50BP56557 158 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 CA9Q16790 459 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 IGSF11Q5DX21 431 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 SLC25A30Q5SVS4 291 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 LCN1P1Q5VSP4 162 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 LYSMD4Q5XG99 296 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 Q6ZR54 194 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 TMEM173Q86WV6 379 aaPredicted RBP3.35□□□□□ -1.87
CCDC38-204ENST00000546816 CATSPERDQ86XM0 798 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 NUP37Q8NFH4 326 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 OR13C3Q8NGS6 347 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 OR6S1Q8NH40 331 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 EXD1Q8NHP7 514 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 MAPK15Q8TD08 544 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 MIPOL1Q8TD10 442 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 APOBEC4Q8WW27 367 aaKnown RBP3.35□□□□□ -1.87
CCDC38-204ENST00000546816 MIS12Q9H081 205 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 PANK3Q9H999 370 aa3.35□□□□□ -1.87
CCDC38-204ENST00000546816 PPANQ9NQ55 473 aaKnown RBP3.35□□□□□ -1.87
CCDC38-204ENST00000546816 FAM207AQ9NSI2 230 aaPredicted RBP3.35□□□□□ -1.87
CCDC38-204ENST00000546816 ZNF215Q9UL58 517 aaPredicted RBP3.35□□□□□ -1.87
CCDC38-204ENST00000546816 SRRM5B3KS81 715 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 BAIAP3O94812 1187 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 GJA1P17302 382 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 LHCGRP22888 699 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 LIMK2P53671 638 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 KRTAP10-1P60331 282 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 GUCY2DQ02846 1103 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 UGT3A1Q6NUS8 523 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 C1orf122Q6ZSJ8 110 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 G2E3Q7L622 706 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 ZNF595Q8IYB9 648 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 POC5Q8NA72 575 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 AQP11Q8NBQ7 271 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 C11orf45Q8TAV5 145 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 SSMEM1Q8WWF3 244 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 ARSGQ96EG1 525 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 FAM120BQ96EK7 910 aaKnown RBP3.34□□□□□ -1.87
CCDC38-204ENST00000546816 FAM20AQ96MK3 541 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 MS4A10Q96PG2 267 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 TREX2Q9BQ50 279 aaPredicted RBP3.34□□□□□ -1.87
CCDC38-204ENST00000546816 CHCHD6Q9BRQ6 235 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 SYNCQ9H7C4 482 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 TRPV4Q9HBA0 871 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 GKN1Q9NS71 199 aa3.34□□□□□ -1.87
CCDC38-204ENST00000546816 TEX10Q9NXF1 929 aaPredicted RBP3.34□□□□□ -1.87
CCDC38-204ENST00000546816 PTRH2Q9Y3E5 179 aaKnown RBP3.34□□□□□ -1.87
CCDC38-204ENST00000546816 GPR75-ASB3A0A0A6YYF3 556 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 PI4K2BG5E9Z4 385 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 BCL2L11O43521 198 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 TRUB2O95900 331 aaKnown RBP3.33□□□□□ -1.88
CCDC38-204ENST00000546816 DANCRP0C864 163 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 CAPN3P20807 821 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 CSTF2P33240 577 aaKnown RBP eCLIP3.33□□□□□ -1.88
CCDC38-204ENST00000546816 NRIP1P48552 1158 aa3.33□□□□□ -1.88
CCDC38-204ENST00000546816 MC1RQ01726 317 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms