RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 AP3B1O00203 1094 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 IFRD1O00458 451 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 LIN7AO14910 233 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 FTH1P02794 183 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 GSNP06396 782 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 PRSS56P0CW18 603 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 FGF5P12034 268 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ETS1P14921 441 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 LIFP15018 202 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 NELFEP18615 380 aaKnown RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ADRA1DP25100 572 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 GRIA1P42261 906 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 SEPHS1P49903 392 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 PPP1CAP62136 330 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 FOXM1Q08050 763 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ABHD18Q0P651 414 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 CCDC38Q502W7 563 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 AARS2Q5JTZ9 985 aaKnown RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 DNTTIP2Q5QJE6 756 aaKnown RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 TSTD2Q5T7W7 516 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 LYPLAL1Q5VWZ2 237 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 MRM1Q6IN84 353 aaKnown RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ZNF449Q6P9G9 518 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 CERS6Q6ZMG9 384 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 TAS2R42Q7RTR8 314 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 THAP5Q7Z6K1 395 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 CFAP206Q8IYR0 622 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ESX1Q8N693 406 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 LILRA3Q8N6C8 439 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 CLDN19Q8N6F1 224 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ZNF655Q8N720 491 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ACVR1CQ8NER5 493 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 PPHLN1Q8NEY8 458 aaKnown RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ADCY4Q8NFM4 1077 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 NAT14Q8WUY8 206 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 KIAA1143Q96AT1 154 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-223ENST00000545440 SLC41A2Q96JW4 573 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 OR6C1Q96RD1 312 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 TTC1Q99614 292 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 CTRCQ99895 268 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 EFHD1Q9BUP0 239 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 ULBP3Q9BZM4 244 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 IL22Q9GZX6 179 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 MVB12BQ9H7P6 319 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 SMARCAL1Q9NZC9 954 aa7.46□□□□□ -1.22
SNHG1-223ENST00000545440 KALRNO60229 2985 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 TRAV20A0A0B4J274 112 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 IGHV5-51A0A0C4DH38 117 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 CCDC78A2IDD5 438 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 OR51F1A6NGY5 319 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 ZNF891A8MT65 544 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 DYRK3O43781 588 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 KIF1CO43896 1103 aaKnown RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 CEP104O60308 925 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 ZBTB11O95625 1053 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 GOT2P00505 430 aaKnown RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PRB1P04280 392 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 POLBP06746 335 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 FOSL1P15407 271 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 WT1P19544 449 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 TPSB2P20231 275 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 RPL22P35268 128 aaKnown RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PPARGP37231 505 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 STAT5AP42229 794 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 GSK3AP49840 483 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PCBP3P57721 371 aaKnown RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PRAMEP78395 509 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 HSD11B2P80365 405 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 BASP1P80723 227 aaKnown RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 CDK16Q00536 496 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PLOD1Q02809 727 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 ACY1Q03154 408 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PRKAA1Q13131 559 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 TUBB3Q13509 450 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 KRT33BQ14525 404 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 TPSAB1Q15661 275 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 ARMC3Q5W041 872 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 ARMC6Q6NXE6 501 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 GSTA5Q7RTV2 222 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PRUNE1Q86TP1 453 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PPP1R3BQ86XI6 285 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 MPP5Q8N3R9 675 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 RASGEF1CQ8N431 466 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 ZNF843Q8N446 348 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 JPH3Q8WXH2 748 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 ASB11Q8WXH4 323 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 ELMO1Q92556 727 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 HDAC10Q969S8 669 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 MISP3Q96FF7 219 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 MED8Q96G25 268 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 SLC45A3Q96JT2 553 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 CCDC140Q96MF4 163 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 FCRL4Q96PJ5 515 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 MAP3K3Q99759 626 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 SLC12A9Q9BXP2 914 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 TFB2MQ9H5Q4 396 aaKnown RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 GPN2Q9H9Y4 310 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 GRPEL1Q9HAV7 217 aa7.45□□□□□ -1.22
SNHG1-223ENST00000545440 MRM3Q9HC36 420 aaKnown RBP7.45□□□□□ -1.22
SNHG1-223ENST00000545440 PDE7BQ9NP56 450 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms