RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 ADGRG4Q8IZF6 3080 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 DSCR3O14972 297 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 PRICKLE3O43900 615 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 GPC4O75487 556 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 IPO13O94829 963 aaKnown RBP14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 KLHL18O94889 574 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 TJP3O95049 919 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 ONECUT2O95948 504 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 HSPA14Q0VDF9 509 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 ELOAQ14241 798 aaKnown RBP14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 SPA17Q15506 151 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 KCTD19Q17RG1 926 aaPredicted RBP14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 FRMPD2BQ6IN97 320 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 RAD9BQ6WBX8 426 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 SPNS2Q8IVW8 549 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 TTC13Q8NBP0 860 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 OR11G2Q8NGC1 345 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 FKBP10Q96AY3 582 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 C8orf44Q96CB5 159 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 ZNF285Q96NJ3 590 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 CUTCQ9NTM9 273 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 NFS1Q9Y697 457 aa14.81□□□□□ -0.04
CLSTN3-213ENST00000541953 ZG16O60844 167 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 IGHEP01854 428 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 OR56A5P0C7T3 313 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 CD9P21926 228 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 TNFRSF8P28908 595 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 TSFMP43897 325 aaKnown RBP14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 BDKRB1P46663 353 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 FIGLAQ6QHK4 219 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 LINC00696Q6ZRV3 163 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 PRSS58Q8IYP2 241 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 CCDC170Q8IYT3 715 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 DNAJB14Q8TBM8 379 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 TM9SF4Q92544 642 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 THOC3Q96J01 351 aaKnown RBP14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 PPP1R2P1Q96PQ5 205 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 SLC26A1Q9H2B4 701 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 WDR54Q9H977 334 aa14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 EPN1Q9Y6I3 576 aaPredicted RBP14.8□□□□□ -0.04
CLSTN3-213ENST00000541953 TACC2O95359 2948 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 LOC105369274A0A096LPK9 316 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 LOC102723532A0A0G2JNH3 316 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 ARHGAP10A1A4S6 786 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 VSTM2BA6NLU5 285 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 ENO4A6NNW6 628 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 QSOX1O00391 747 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 FFAR3O14843 346 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 GPR42O15529 346 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 FTCDO95954 541 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 CELA2AP08217 269 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 ETS1P14921 441 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 EFNA3P52797 238 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 ACVR1Q04771 509 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 CDC16Q13042 620 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 ZNF169Q14929 603 aaPredicted RBP14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 TUBB8Q3ZCM7 444 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 DNAJC21Q5F1R6 531 aaKnown RBP14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 TSTD2Q5T7W7 516 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 DCUN1D3Q8IWE4 304 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 OR4N4Q8N0Y3 316 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 SHISA5Q8N114 240 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 OR2L8Q8NGY9 312 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 DENND1AQ8TEH3 1009 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 FAR1Q8WVX9 515 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 DLG3Q92796 817 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 SLX1AQ9BQ83 275 aa14.79□□□□□ -0.04
CLSTN3-213ENST00000541953 CPAMD8Q8IZJ3 1885 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 A0A1W2PPV9 198 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 FITM1A5D6W6 292 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 RASGRF2O14827 1237 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 ALBP02768 609 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 CD63P08962 238 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 AOAHP28039 575 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 CYLC1P35663 651 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 NAP1L1P55209 391 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 VSX2P58304 361 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 SNRPNP63162 240 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 KLC1Q07866 573 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 ZRSR2Q15696 482 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 RBBP7Q16576 425 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 P3H1Q32P28 736 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 AGAP7PQ5VUJ5 663 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 AFTPHQ6ULP2 937 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 LAPTM4BQ86VI4 370 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 OR4L1Q8NH43 312 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 C10orf90Q96M02 699 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 AGAP4Q96P64 663 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 TAAR6Q96RI8 345 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 SELENOSQ9BQE4 189 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 UNKQ9C0B0 810 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 LHPPQ9H008 270 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 ETNK1Q9HBU6 452 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 ZNF160Q9HCG1 818 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 AGPAT4Q9NRZ5 378 aa14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 TSR3Q9UJK0 312 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 ANKRD17O75179 2603 aaKnown RBP14.78□□□□□ -0.04
CLSTN3-213ENST00000541953 A0A0J9YVX5 310 aa14.77□□□□□ -0.05
CLSTN3-213ENST00000541953 BTNL10A8MVZ5 291 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms