RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LDLRAP1Q5SW96 308 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 FRG2Q64ET8 278 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 DNAJC14Q6Y2X3 702 aaPredicted RBP13.63□□□□□ -0.23
LIMK1-208ENST00000538333 PARS2Q7L3T8 475 aaKnown RBP13.63□□□□□ -0.23
LIMK1-208ENST00000538333 TSPAN14Q8NG11 270 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 DNAJB8Q8NHS0 232 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 ITFG1Q8TB96 612 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 ZFAND2BQ8WV99 257 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 GLYATL1Q969I3 302 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 DGCR14Q96DF8 476 aaKnown RBP13.63□□□□□ -0.23
LIMK1-208ENST00000538333 FCRL1Q96LA6 429 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 FRG2BQ96QU4 278 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
LIMK1-208ENST00000538333 CARS2Q9HA77 564 aaKnown RBP13.63□□□□□ -0.23
LIMK1-208ENST00000538333 PPT2Q9UMR5 302 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 MYRFQ9Y2G1 1151 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 TMED5Q9Y3A6 229 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 PCDHB14Q9Y5E9 798 aa13.63□□□□□ -0.23
LIMK1-208ENST00000538333 ALPK3Q96L96 1907 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 UGDHO60701 494 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 ASLP04424 464 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 RAP2AP10114 183 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 AMD1P17707 334 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 PTPN6P29350 595 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 PRLHRP49683 370 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 FPGSQ05932 587 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 CHIT1Q13231 466 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 GRIN2CQ14957 1233 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 CYP2U1Q7Z449 544 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 RAVER1Q8IY67 606 aaKnown RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 OR52E4Q8NGH9 312 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 TESCQ96BS2 214 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 RSPRY1Q96DX4 576 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 RMND5BQ96G75 393 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 TSSK3Q96PN8 268 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 SH3GL1Q99961 368 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 KCNH6Q9H252 994 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 KAT8Q9H7Z6 458 aaKnown RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 ITM2BQ9Y287 266 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 COMMD3-BMI1R4GMX3 469 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 MUC22E2RYF6 1773 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 A0A096LPI6 279 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 SLC5A10A0PJK1 596 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 CLOCKO15516 846 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 HOXC11O43248 304 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 SPINT1O43278 529 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 ERN1O75460 977 aaKnown RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 ELFN1P0C7U0 828 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 ADH5P11766 374 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 XPAP23025 273 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 GZMMP51124 257 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 MESP2Q0VG99 397 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 ADRM1Q16186 407 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 LIPJQ5W064 366 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 TBPL2Q6SJ96 375 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 CALHM3Q86XJ0 350 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 FAM9CQ8IZT9 166 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 LILRA3Q8N6C8 439 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 FAM86B1Q8N7N1 296 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 WFIKKN2Q8TEU8 576 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 GLMNQ92990 594 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 MAGEB10Q96LZ2 347 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 CPPED1Q9BRF8 314 aaPredicted RBP13.62□□□□□ -0.23
LIMK1-208ENST00000538333 BDH2Q9BUT1 245 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 CAAP1Q9H8G2 361 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 AP3M1Q9Y2T2 418 aa13.62□□□□□ -0.23
LIMK1-208ENST00000538333 ELOVL7A1L3X0 281 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 C5orf67F2Z3F1 127 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ZNF197O14709 1029 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ETS2P15036 469 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 PCSK2P16519 638 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 S100A3P33764 101 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 HALP42357 657 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 RPS9P46781 194 aaKnown RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 TMEM115Q12893 351 aaPredicted RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ABRQ12979 859 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 NKG7Q16617 165 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ZNF658BQ4V348 819 aaPredicted RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 FAM98BQ52LJ0 330 aaKnown RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 CYBRD1Q53TN4 286 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ATG9BQ674R7 924 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 BORAQ6PGQ7 559 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 KLHDC8AQ8IYD2 350 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 C10orf111Q8N326 155 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 RNF175Q8N4F7 328 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 CELF5Q8N6W0 485 aaKnown RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 TNIP2Q8NFZ5 429 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 WDR20Q8TBZ3 569 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 HM13Q8TCT9 377 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 FIG4Q92562 907 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 FOXJ1Q92949 421 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 AP2M1Q96CW1 435 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 VPS50Q96JG6 964 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 EGLN2Q96KS0 407 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 CD320Q9NPF0 282 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 SMPD3Q9NY59 655 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms