RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 DUSP10Q9Y6W6 482 aa11.92□□□□□ -0.5
CAPN1-223ENST00000533079 A0A1W2PQ72 361 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 VSTM2BA6NLU5 285 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 MAP2K7O14733 419 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 LIN7AO14910 233 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-223ENST00000533079 PRICKLE3O43900 615 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-223ENST00000533079 KLHL18O94889 574 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 RASAL1O95294 804 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 CRTAMO95727 393 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 HADHBP55084 474 aaKnown RBP11.91□□□□□ -0.5
CAPN1-223ENST00000533079 AP2B1P63010 937 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 XIAPP98170 497 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 PRKG2Q13237 762 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 GRM7Q14831 915 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 WHAMMP3Q1A5X7 153 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 GPR33Q49SQ1 333 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 ODF2Q5BJF6 829 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 SNX20Q7Z614 316 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 RFX6Q8HWS3 928 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 CEP112Q8N8E3 955 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 PHC3Q8NDX5 983 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 OR5K2Q8NHB8 316 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 NAT14Q8WUY8 206 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 MTFMTQ96DP5 389 aaKnown RBP11.91□□□□□ -0.5
CAPN1-223ENST00000533079 CRB3Q9BUF7 120 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 FICDQ9BVA6 458 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 SOX17Q9H6I2 414 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-223ENST00000533079 MCCC2Q9HCC0 563 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 ZDHHC3Q9NYG2 299 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 CTSFQ9UBX1 484 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 ASF1AQ9Y294 204 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 MRPS2Q9Y399 296 aaKnown RBP11.91□□□□□ -0.5
CAPN1-223ENST00000533079 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
CAPN1-223ENST00000533079 SLC19A2O60779 497 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 AP2A2O94973 939 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 CLDN14O95500 239 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 AP2A1O95782 977 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 MLYCDO95822 493 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 KRT1P04264 644 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 CTSBP07858 339 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 ACRV1P26436 265 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 PDHA2P29803 388 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 DYNLT1P63172 113 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 ADORA2A-AS1P86434 159 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 PLOD1Q02809 727 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-223ENST00000533079 TFDP2Q14188 446 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 ZC3H12BQ5HYM0 836 aaKnown RBP11.9□□□□□ -0.5
CAPN1-223ENST00000533079 FAM182AQ5T1J6 154 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 LRRC38Q5VT99 294 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 RIPOR1Q6ZS17 1223 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 CEP97Q8IW35 865 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 TMEM151BQ8IW70 566 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 ZNF567Q8N184 647 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 TTC29Q8NA56 475 aaPredicted RBP11.9□□□□□ -0.5
CAPN1-223ENST00000533079 OR5AR1Q8NGP9 310 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 SLC22A18Q96BI1 424 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 NRTNQ99748 197 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 ZNF160Q9HCG1 818 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 CUTCQ9NTM9 273 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 INTS7Q9NVH2 962 aaKnown RBP11.9□□□□□ -0.5
CAPN1-223ENST00000533079 DDX56Q9NY93 547 aaKnown RBP11.9□□□□□ -0.5
CAPN1-223ENST00000533079 SPHK1Q9NYA1 384 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 RNF14Q9UBS8 474 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 TRHDEQ9UKU6 1024 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 SAR1BQ9Y6B6 198 aa11.9□□□□□ -0.5
CAPN1-223ENST00000533079 NSG1A0A0A6YYJ2 146 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 TRBV5-4A0A0C4DH59 114 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 MACROD2A1Z1Q3 448 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 FITM1A5D6W6 292 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 EFCAB8A8MWE9 144 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 ISM1B1AKI9 464 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 ANXA9O76027 345 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 FKBP9O95302 570 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 BMP10O95393 424 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 PRR35P0CG20 571 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 ESRRAP11474 423 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-223ENST00000533079 MAGP20916 626 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 NSG1P42857 185 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 RAB28P51157 221 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 ZNF140P52738 457 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-223ENST00000533079 GEMP55040 296 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 CACNG1Q06432 222 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 PTPRCAPQ14761 206 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 FAM214AQ32MH5 1076 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 PRMT9Q6P2P2 845 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 PID1Q7Z2X4 250 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 MAGED4Q96JG8 741 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 GBA3Q9H227 469 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 GPAMQ9HCL2 828 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 PTGFRNQ9P2B2 879 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 RSPH14Q9UHP6 348 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 TFR2Q9UP52 801 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 CPAMD8Q8IZJ3 1885 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 SPTBP11277 2137 aa11.89□□□□□ -0.51
CAPN1-223ENST00000533079 HACD1B0YJ81 288 aa11.88□□□□□ -0.51
CAPN1-223ENST00000533079 H7C0S8 307 aa11.88□□□□□ -0.51
CAPN1-223ENST00000533079 CES2O00748 559 aa11.88□□□□□ -0.51
CAPN1-223ENST00000533079 S1PR4O95977 384 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms