RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 PUS10Q3MIT2 529 aaKnown RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 XKR7Q5GH72 579 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 GPRC6AQ5T6X5 926 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 ATAD3BQ5T9A4 648 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 Q6ZSR9 355 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 USP43Q70EL4 1123 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 SPRED1Q7Z699 444 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 BTLAQ7Z6A9 289 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 SFRP1Q8N474 314 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 ANKK1Q8NFD2 765 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 CAPSLQ8WWF8 208 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 HTATIP2Q9BUP3 242 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 SP140LQ9H930 580 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 TNPO3Q9Y5L0 923 aaKnown RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 FAM172BPA6NC97 362 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 BBIP1A8MTZ0 92 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 SLC22A3O75751 556 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 POP4O95707 220 aaKnown RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 ENO2P09104 434 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 C1SP09871 688 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 RECQLP46063 649 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 RAD23AP54725 363 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 HTRA4P83105 476 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 ABRAXAS2Q15018 415 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 GPR33Q49SQ1 333 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 ARHGAP15Q53QZ3 475 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 PAGE3Q5JUK9 113 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 HACD2Q6Y1H2 254 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 USP51Q70EK9 711 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 GRASPQ7Z6J2 395 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 DCP2Q8IU60 420 aaKnown RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 PIAS4Q8N2W9 510 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 FAM110BQ8TC76 370 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 CANT1Q8WVQ1 401 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 SCAMP4Q969E2 229 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 ROPN1LQ96C74 230 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 LRRC58Q96CX6 371 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 CENPNQ96H22 339 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 MED30Q96HR3 178 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 SMPD3Q9NY59 655 aaPredicted RBP11.28□□□□□ -0.6
USP35-207ENST00000530546 OPTCQ9UBM4 332 aa11.28□□□□□ -0.6
USP35-207ENST00000530546 GBF1Q92538 1859 aa11.27□□□□□ -0.6
USP35-207ENST00000530546 KRT87PA6NCN2 255 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 CCDC154A6NI56 674 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 AQP12BA6NM10 295 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 TTC34A8MYJ7 566 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 KCNH1O95259 989 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 ENDOUP21128 410 aaKnown RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 ERVK-8P63133 956 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 B4GALNT1Q00973 533 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 BOP1Q14137 746 aaKnown RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 INPP5AQ14642 412 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 PCBP2Q15366 365 aaKnown RBP eCLIP11.27□□□□□ -0.61
USP35-207ENST00000530546 PGS1Q32NB8 556 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 RABL3Q5HYI8 236 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 LYPLAL1Q5VWZ2 237 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 TMEM215Q68D42 235 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 MACC1Q6ZN28 852 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 AQP12AQ8IXF9 295 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 GPR65Q8IYL9 337 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 CLP1Q92989 425 aaKnown RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 MTFMTQ96DP5 389 aaKnown RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 FBXL20Q96IG2 436 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 SPHK2Q9NRA0 654 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 CMTM6Q9NX76 183 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 ZDHHC3Q9NYG2 299 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 SLAMF8Q9P0V8 285 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 CRNNQ9UBG3 495 aaPredicted RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 OARD1Q9Y530 152 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 FXYD1O00168 92 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 GUCY1B2O75343 617 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 DNAJB5O75953 348 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 MATN4O95460 622 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 PRR35P0CG20 571 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 FCGR1AP12314 374 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 ATP6V1B2P21281 511 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 IL10P22301 178 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 FASP25445 335 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 IL12AP29459 219 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 CCR7P32248 378 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 NSG1P42857 185 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 TTLL9Q3SXZ7 439 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 ZNF648Q5T619 568 aaPredicted RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 C8orf82Q6P1X6 216 aaPredicted RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 GDPD4Q6W3E5 623 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 RBM23Q86U06 439 aaKnown RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 GALNT13Q8IUC8 556 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 CBARPQ8N350 705 aaPredicted RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 BPIFB6Q8NFQ5 453 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 ECHDC3Q96DC8 303 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 CSF3RQ99062 836 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 BCL7BQ9BQE9 202 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 FBXO8Q9NRD0 319 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 FARSBQ9NSD9 589 aaKnown RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 KLQ9UEF7 1012 aa11.27□□□□□ -0.61
USP35-207ENST00000530546 AURKCQ9UQB9 309 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms