RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 NLE1Q9NVX2 485 aaPredicted RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 PTGFRNQ9P2B2 879 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 CTSFQ9UBX1 484 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ZC3H7BQ9UGR2 993 aaKnown RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 AMFRQ9UKV5 643 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 GUCA1BQ9UMX6 200 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 AAR2Q9Y312 384 aaKnown RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 HS3ST3B1Q9Y662 390 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.31□□□□□ -1.4
CD44-221ENST00000526000 ITPR2Q14571 2701 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ZGRF1Q86YA3 2104 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 IGLV3-16A0A075B6K0 115 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 LOC105369274A0A096LPK9 316 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 LOC102723532A0A0G2JNH3 316 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 A0A0J9YVX5 310 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 SLC5A10A0PJK1 596 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 GRID2IPA4D2P6 1211 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 KLHL33A6NCF5 533 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 AGAP14A8MT82 685 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 APOC4-APOC2K7ER74 178 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 KIF2AO00139 706 aaPredicted RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 CCL21O00585 134 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 LIN7AO14910 233 aaPredicted RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 NRP2O60462 931 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 KLHL41O60662 606 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 STK10O94804 968 aaKnown RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 MED26O95402 600 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 METTL18O95568 372 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 APOC2P02655 101 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 CD63P08962 238 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 MSL3P1P0C860 447 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 PSMB5P28074 263 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 CTNNA1P35221 906 aaKnown RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 SOX8P57073 446 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 ARG2P78540 354 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 EEF1A2Q05639 463 aaKnown RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 CACNG1Q06432 222 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 RPA4Q13156 261 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 TSTA3Q13630 321 aaPredicted RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 TUBB8Q3ZCM7 444 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 GPR33Q49SQ1 333 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 CCSMST1Q4G0I0 132 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 VWA2Q5GFL6 755 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 WASHC2DQ5SRD0 308 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 FAM180AQ6UWF9 173 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 ISLR2Q6UXK2 745 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 GFRALQ6UXV0 394 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 COX15Q7KZN9 410 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 PEX26Q7Z412 305 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 PRUNE1Q86TP1 453 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 LAPTM4BQ86VI4 370 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 CDKL3Q8IVW4 592 aaPredicted RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 REXO1L1PQ8IX06 675 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 KATNAL2Q8IYT4 538 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 OR4N4Q8N0Y3 316 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 SLC34A3Q8N130 599 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 FAM71DQ8N9W8 422 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 LINC01555Q8NAE3 123 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 OR11G2Q8NGC1 345 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 OR52K1Q8NGK4 314 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 LKAAEAR1Q8TD35 194 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 SKA2Q8WVK7 121 aaPredicted RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 HDAC10Q969S8 669 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 TAAR6Q96RI8 345 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 BARD1Q99728 777 aaKnown RBP6.3□□□□□ -1.4
CD44-221ENST00000526000 MIPEPQ99797 713 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 CRB3Q9BUF7 120 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 OSBPL8Q9BZF1 889 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 LHPPQ9H008 270 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.3□□□□□ -1.4
CD44-221ENST00000526000 VPS37BQ9H9H4 285 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 ABCF3Q9NUQ8 709 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 OLAHQ9NV23 265 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 SLC2A6Q9UGQ3 507 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 POLG2Q9UHN1 485 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 C3orf18Q9UK00 162 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 SLC39A10Q9ULF5 831 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 ENTPD4Q9Y227 616 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 EFR3BQ9Y2G0 817 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 ZKSCAN5Q9Y2L8 839 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 JRKLQ9Y4A0 524 aa6.3□□□□□ -1.4
CD44-221ENST00000526000 CENPEQ02224 2701 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 TRBV5-4A0A0C4DH59 114 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 A0A1B0GUH1 482 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 A0A1B0GX78 115 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 A8MUI8 341 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 CES2O00748 559 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 DSCR3O14972 297 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 CTSVO60911 334 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 WFS1O76024 890 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 UNC5CO95185 931 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 AP2A1O95782 977 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 GOT2P00505 430 aaKnown RBP6.29□□□□□ -1.4
CD44-221ENST00000526000 FTH1P02794 183 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 STATHP02808 62 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 OR56A5P0C7T3 313 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 PIM1P11309 404 aaPredicted RBP6.29□□□□□ -1.4
CD44-221ENST00000526000 EDN3P14138 238 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 CD9P21926 228 aa6.29□□□□□ -1.4
CD44-221ENST00000526000 PKLRP30613 574 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms