RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 DKK3Q9UBP4 350 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 ZNF639Q9UID6 485 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 PCDHB14Q9Y5E9 798 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 CLOCKO15516 846 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 B3GALT4O96024 378 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 MYF6P23409 242 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 FPGSQ05932 587 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 FRG2Q64ET8 278 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 FBXO46Q6PJ61 603 aaPredicted RBP25.02■■□□□ 1.6
COL13A1-213ENST00000520267 PARS2Q7L3T8 475 aaKnown RBP25.02■■□□□ 1.6
COL13A1-213ENST00000520267 SLC22A15Q8IZD6 547 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 MAGEE2Q8TD90 523 aaPredicted RBP25.02■■□□□ 1.6
COL13A1-213ENST00000520267 FRG2BQ96QU4 278 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 RBM38Q9H0Z9 239 aaKnown RBP25.02■■□□□ 1.6
COL13A1-213ENST00000520267 SLC9A3R1O14745 358 aaPredicted RBP25.02■■□□□ 1.6
COL13A1-213ENST00000520267 GMNNO75496 209 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 JUPP14923 745 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 ZNF23P17027 643 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 CD22P20273 847 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 PREPP48147 710 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 ACOX1Q15067 660 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 GLYATL1Q969I3 302 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 EGLN2Q96KS0 407 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 INPP5KQ9BT40 448 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 BDH2Q9BUT1 245 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 CIDEBQ9UHD4 219 aa25.02■■□□□ 1.6
COL13A1-213ENST00000520267 CLGNO14967 610 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 PSIP1O75475 530 aaKnown RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 SRPRAP08240 638 aaKnown RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ELFN1P0C7U0 828 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 RAP2AP10114 183 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 C7P10643 843 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ADH5P11766 374 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 PCNAP12004 261 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 AMD1P17707 334 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 S100A3P33764 101 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 METAP1P53582 386 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 CCSMST1Q4G0I0 132 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 SYTL3Q4VX76 610 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 FAM98BQ52LJ0 330 aaKnown RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 LDLRAP1Q5SW96 308 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 NAIF1Q69YI7 327 aaPredicted RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ENPP6Q6UWR7 440 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ANKRD46Q86W74 232 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 CYGBQ8WWM9 190 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ZNF707Q96C28 371 aaPredicted RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 AP2M1Q96CW1 435 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 NMD3Q96D46 503 aaKnown RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 APOLD1Q96LR9 279 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 VPS35Q96QK1 796 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 SH3GL1Q99961 368 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 KCNH6Q9H252 994 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 HPS4Q9NQG7 708 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ADGRE2Q9UHX3 823 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 INVSQ9Y283 1065 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 MRPS23Q9Y3D9 190 aaKnown RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 COMMD3-BMI1R4GMX3 469 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ELOVL7A1L3X0 281 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 UPK1AO00322 258 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 LRATO95237 230 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 CLIC3O95833 236 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 RPS9P46781 194 aaKnown RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 MESP2Q0VG99 397 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ZFP28Q8NHY6 868 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 FBXO30Q8TB52 745 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 ZFAND2BQ8WV99 257 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 RSPRY1Q96DX4 576 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 AURKBQ96GD4 344 aaPredicted RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 FBXL20Q96IG2 436 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 LRIG1Q96JA1 1093 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 FAM83CQ9BQN1 747 aa25.01■■□□□ 1.59
COL13A1-213ENST00000520267 WRAP53Q9BUR4 548 aaKnown RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 SMPD3Q9NY59 655 aaPredicted RBP25.01■■□□□ 1.59
COL13A1-213ENST00000520267 SERTM1A2A2V5 107 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 LINC01553A4QN01 128 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 NPIPB8E9PQR5 432 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 GSNP06396 782 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 MAP4P27816 1152 aaKnown RBP25■■□□□ 1.59
COL13A1-213ENST00000520267 IRF8Q02556 426 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 ADRM1Q16186 407 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 PGS1Q32NB8 556 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 LRIF1Q5T3J3 769 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 TMEM214Q6NUQ4 689 aaKnown RBP25■■□□□ 1.59
COL13A1-213ENST00000520267 GCNT7Q6ZNI0 430 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 THOC6Q86W42 341 aaKnown RBP25■■□□□ 1.59
COL13A1-213ENST00000520267 C10orf111Q8N326 155 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 CPPED1Q9BRF8 314 aaPredicted RBP25■■□□□ 1.59
COL13A1-213ENST00000520267 HAUS8Q9BT25 410 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 KAT8Q9H7Z6 458 aaKnown RBP25■■□□□ 1.59
COL13A1-213ENST00000520267 CLK4Q9HAZ1 481 aaKnown RBP25■■□□□ 1.59
COL13A1-213ENST00000520267 MAN2B2Q9Y2E5 1009 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 LRRK1Q38SD2 2015 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 CHRNB3Q05901 458 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 TMEM115Q12893 351 aaPredicted RBP25■■□□□ 1.59
COL13A1-213ENST00000520267 NKG7Q16617 165 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 GFM2Q969S9 779 aaKnown RBP25■■□□□ 1.59
COL13A1-213ENST00000520267 TMEM159Q96B96 161 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 WBP1LQ9NX94 342 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 GPRC5BQ9NZH0 403 aa25■■□□□ 1.59
COL13A1-213ENST00000520267 LIMD1Q9UGP4 676 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms