RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 PCDHGB5Q9Y5G0 923 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 GABARAPO95166 117 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 RPP38P78345 283 aaKnown RBP8.32□□□□□ -1.08
PCM1-212ENST00000519253 PROX2Q3B8N5 592 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 TBRG1Q3YBR2 411 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 ZNF367Q7RTV3 350 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 LGI4Q8N135 537 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 CACTIN-AS1Q8N1I8 211 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 C2orf69Q8N8R5 385 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 NDNFQ8TB73 568 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 ZNF675Q8TD23 568 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 EEF1AKMT1Q8WVE0 214 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 C1orf74Q96LT6 269 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 POLR2J2Q9GZM3 115 aaKnown RBP8.32□□□□□ -1.08
PCM1-212ENST00000519253 ABCG8Q9H221 673 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 ATP13A3Q9H7F0 1226 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 OR6C70A6NIJ9 312 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 MANBAO00462 879 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 SULT1C4O75897 302 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 AGXTP21549 392 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 AGTR2P50052 363 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 ZNF789Q5FWF6 425 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 C10orf62Q5T681 223 aaPredicted RBP8.32□□□□□ -1.08
PCM1-212ENST00000519253 ERAP2Q6P179 960 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 CCDC28AQ8IWP9 274 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 CLIP4Q8N3C7 705 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 OR4A15Q8NGL6 344 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 EMID1Q96A84 441 aaPredicted RBP8.32□□□□□ -1.08
PCM1-212ENST00000519253 PTERQ96BW5 349 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 RNF39Q9H2S5 420 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 TP63Q9H3D4 680 aaPredicted RBP8.32□□□□□ -1.08
PCM1-212ENST00000519253 NLE1Q9NVX2 485 aaPredicted RBP8.32□□□□□ -1.08
PCM1-212ENST00000519253 SMPD4Q9NXE4 827 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 PCTPQ9UKL6 214 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 KCNE2Q9Y6J6 123 aa8.32□□□□□ -1.08
PCM1-212ENST00000519253 DLGAP1O14490 977 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 BEST1O76090 585 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ENGP17813 658 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 HTR1BP28222 390 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 SHMT2P34897 504 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ARSDP51689 593 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 NPRL3Q12980 569 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 DUOXA1Q1HG43 343 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ZNF385DQ9H6B1 395 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ZFYVE1Q9HBF4 777 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 GULP1Q9UBP9 304 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 RIMKLBQ9ULI2 386 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 PCDHGB6Q9Y5F9 930 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 PLOD3O60568 738 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 PRAMEF1O95521 474 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 RPS17P08708 135 aaKnown RBP8.31□□□□□ -1.08
PCM1-212ENST00000519253 TCEA1P23193 301 aaKnown RBP8.31□□□□□ -1.08
PCM1-212ENST00000519253 RIPPLY1Q0D2K3 151 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 SERINC3Q13530 473 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 PTGR1Q14914 329 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 SMU1Q2TAY7 513 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 AGAP6Q5VW22 663 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 USP45Q70EL2 814 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 LACC1Q8IV20 430 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 LILRB4Q8NHJ6 448 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 AGAP4Q96P64 663 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 KCNC2Q96PR1 638 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 TRNT1Q96Q11 434 aaKnown RBP8.31□□□□□ -1.08
PCM1-212ENST00000519253 SPATA5L1Q9BVQ7 753 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 TMEM248Q9NWD8 314 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 TRPC4Q9UBN4 977 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ZNF282Q9UDV7 671 aaPredicted RBP8.31□□□□□ -1.08
PCM1-212ENST00000519253 SEC14L4Q9UDX3 406 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 SLC9A8Q9Y2E8 581 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 PCDHGC4Q9Y5F7 938 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 CLDN24A6NM45 220 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ARVCFO00192 962 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 QSOX1O00391 747 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ITGB1P05556 798 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 KRT33BQ14525 404 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 TSTQ16762 297 aaKnown RBP8.31□□□□□ -1.08
PCM1-212ENST00000519253 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.31□□□□□ -1.08
PCM1-212ENST00000519253 SDHAF4Q5VUM1 108 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 TAPT1Q6NXT6 567 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 C16orf62Q7Z3J2 963 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 METTL3Q86U44 580 aaKnown RBP8.31□□□□□ -1.08
PCM1-212ENST00000519253 C11orf74Q86VG3 221 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 SERPINA9Q86WD7 417 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ZSWIM9Q86XI8 627 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 MYO19Q96H55 970 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 GPR78Q96P69 363 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ADAM2Q99965 735 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 DUSP26Q9BV47 211 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 YIPF2Q9BWQ6 316 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 PLAC1Q9HBJ0 212 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ZNF222Q9UK12 451 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 GLYATL1P3A0A0U1RQE8 302 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 PDHXO00330 501 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 NDUFB5O43674 189 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ITGAMP11215 1152 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 ERP29P30040 261 aaKnown RBP8.31□□□□□ -1.08
PCM1-212ENST00000519253 TUFMP49411 452 aaKnown RBP8.31□□□□□ -1.08
PCM1-212ENST00000519253 NUDT6P53370 316 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 CDH4P55283 916 aa8.31□□□□□ -1.08
PCM1-212ENST00000519253 FOXA1P55317 472 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms