RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	FBXO2	Q9UK22	296 aa	Predicted RBP	5.23	□□□□□ -1.57
LINC01088-208	ENST00000511895	GAB2	Q9UQC2	676 aa		5.23	□□□□□ -1.57
LINC01088-208	ENST00000511895	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.23	□□□□□ -1.57	1e-7	■□□□□ 11.2
LINC01088-208	ENST00000511895	LOC100509620	A0A075B734	347 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	PLOD2	O00469	737 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	T	O15178	435 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	PCDH7	O60245	1069 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	PRAMEF11	O60813	436 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	ACP2	P11117	423 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	SIRPA	P78324	504 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	STK4	Q13043	487 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	KRT79	Q5XKE5	535 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	DHRS7B	Q6IAN0	325 aa	Predicted RBP	5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	USP50	Q70EL3	339 aa	Predicted RBP	5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	GPC2	Q8N158	579 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	OR2T12	Q8NG77	320 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	FCAMR	Q8WWV6	532 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	ZNF501	Q96CX3	271 aa	Predicted RBP	5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	OR6C1	Q96RD1	312 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	RHNO1	Q9BSD3	238 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	ABHD6	Q9BV23	337 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	MXD3	Q9BW11	206 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	PPIL3	Q9H2H8	161 aa	Known RBP	5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	SCRT2	Q9NQ03	307 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	WSB2	Q9NYS7	404 aa	Predicted RBP	5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	MRPL15	Q9P015	296 aa	Known RBP	5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	ZNF624	Q9P2J8	865 aa	Predicted RBP	5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	ACAD8	Q9UKU7	415 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	TRIM17	Q9Y577	477 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	ACACB	O00763	2458 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	FLT1	P17948	1338 aa		5.22	□□□□□ -1.57
LINC01088-208	ENST00000511895	BCOR	Q6W2J9	1755 aa		5.21	□□□□□ -1.57
LINC01088-208	ENST00000511895	NUP155	O75694	1391 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	FAM208B	Q5VWN6	2430 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	OR6C76	A6NM76	312 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	BLOC1S5-TXNDC5	H3BN57	136 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	ENTPD3	O75355	529 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	BEST1	O76090	585 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	BCL10	O95999	233 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	CFC1B	P0CG36	223 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	CFC1	P0CG37	223 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	GABRA5	P31644	462 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	GLIPR1	P48060	266 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	CDH11	P55287	796 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	RBM39	Q14498	530 aa	Known RBP	5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	PCLAF	Q15004	111 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	C15orf59	Q2T9L4	293 aa	Predicted RBP	5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	TMEM31	Q5JXX7	168 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	LINC00346	Q8IVM7	164 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	DNAJC22	Q8N4W6	341 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	SLC22A18	Q96BI1	424 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	F2RL3	Q96RI0	385 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	FNDC11	Q9BVV2	318 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	MOV10L1	Q9BXT6	1211 aa	Known RBP	5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	PELI2	Q9HAT8	420 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	SLC52A3	Q9NQ40	469 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	GIMAP4	Q9NUV9	329 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	DDX43	Q9NXZ2	648 aa	Known RBP	5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	RHCG	Q9UBD6	479 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	SLC7A7	Q9UM01	511 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895	PIK3C2G	O75747	1445 aa		5.21	□□□□□ -1.58
LINC01088-208	ENST00000511895		A6NL46	340 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	PRSS47	A8MTI9	375 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	ADAMDEC1	O15204	470 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	XRCC3	O43542	346 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	AHCYL1	O43865	530 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	TSHB	P01222	138 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	IGHV4-38-2	P0DP08	117 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	TRIM21	P19474	475 aa	Known RBP	5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	CHRNB4	P30926	498 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	RFC4	P35249	363 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	TUBB4B	P68371	445 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	ZNF876P	Q49A33	203 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	PLD3	Q8IV08	490 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	FAM114A1	Q8IWE2	563 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	PRPF31	Q8WWY3	499 aa	Known RBP	5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	C16orf70	Q9BSU1	422 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	FSD1	Q9BTV5	496 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	MMP27	Q9H306	513 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	PDE7B	Q9NP56	450 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	ADPRHL2	Q9NX46	363 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	CHORDC1	Q9UHD1	332 aa	Predicted RBP	5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	ERRFI1	Q9UJM3	462 aa	Predicted RBP	5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	RPS6KA6	Q9UK32	745 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	C2CD2	Q9Y426	696 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	SNX8	Q9Y5X2	465 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	ZNF292	O60281	2723 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	MON2	Q7Z3U7	1717 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	ZNF318	Q5VUA4	2279 aa		5.2	□□□□□ -1.58
LINC01088-208	ENST00000511895	AFDN	P55196	1824 aa	Known RBP	5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	MAGEB17	A8MXT2	336 aa		5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	CREG1	O75629	220 aa		5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	CSPG5	O95196	566 aa		5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	CRIP2	P52943	208 aa	Predicted RBP	5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	CFAP161	Q6P656	301 aa		5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	CORO6	Q6QEF8	472 aa		5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	FIGLA	Q6QHK4	219 aa		5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	FOXP4	Q8IVH2	680 aa	Predicted RBP	5.19	□□□□□ -1.58
LINC01088-208	ENST00000511895	TDH	Q8IZJ6	230 aa		5.19	□□□□□ -1.58

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