RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 VKORC1Q9BQB6 163 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 THAP2Q9H0W7 228 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 STMN3Q9NZ72 180 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 ZNF282Q9UDV7 671 aaPredicted RBP11.05□□□□□ -0.64
RNF4-216ENST00000511859 TEKT2Q9UIF3 430 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 C3orf18Q9UK00 162 aa11.05□□□□□ -0.64
RNF4-216ENST00000511859 NSD1Q96L73 2696 aaPredicted RBP11.04□□□□□ -0.64
RNF4-216ENST00000511859 A0A1W2PQ72 361 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 ZNF487B1APH4 448 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 WISP2O76076 250 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 CYP1A2P05177 515 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 COX6A1P12074 109 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
RNF4-216ENST00000511859 CHRNA4P43681 627 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 OR1D4P47884 311 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 TFDP3Q5H9I0 405 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 ABHD17BQ5VST6 288 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 KDELC1Q6UW63 502 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 DNAAF3Q8N9W5 541 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 TTC29Q8NA56 475 aaPredicted RBP11.04□□□□□ -0.64
RNF4-216ENST00000511859 SPC24Q8NBT2 197 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 SDCCAG3Q96C92 435 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 C8orf44Q96CB5 159 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 MRGPRX2Q96LB1 330 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 OLFM3Q96PB7 478 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 COPS8Q99627 209 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 MAK16Q9BXY0 300 aaKnown RBP11.04□□□□□ -0.64
RNF4-216ENST00000511859 GSX1Q9H4S2 264 aaPredicted RBP11.04□□□□□ -0.64
RNF4-216ENST00000511859 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 ZNF304Q9HCX3 659 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 LUC7LQ9NQ29 371 aaKnown RBP11.04□□□□□ -0.64
RNF4-216ENST00000511859 CRLS1Q9UJA2 301 aa11.04□□□□□ -0.64
RNF4-216ENST00000511859 FITM1A5D6W6 292 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 TTI1O43156 1089 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 SRPX2O60687 465 aaPredicted RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 GYPCP04921 128 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 PTPN3P26045 913 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 FOLH1Q04609 750 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 MPP3Q13368 585 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 PTPRCAPQ14761 206 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 PCOLCEQ15113 449 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 TAF1AQ15573 450 aaPredicted RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 ZNF766Q5HY98 468 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 SLC9A4Q6AI14 798 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 PRMT9Q6P2P2 845 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 CNSTQ6PJW8 725 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 BZW1Q7L1Q6 419 aaKnown RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 TMEM200AQ86VY9 491 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 VSIG1Q86XK7 387 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 OR4K2Q8NGD2 314 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 OR5AR1Q8NGP9 310 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 AGAP11Q8TF27 550 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 SLC22A18Q96BI1 424 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 ZNF285Q96NJ3 590 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 DMRTA2Q96SC8 542 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 ZNF559Q9BR84 538 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 MESP1Q9BRJ9 268 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 INTS7Q9NVH2 962 aaKnown RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 RIC8BQ9NVN3 520 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 KCNN3Q9UGI6 736 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 ASF1AQ9Y294 204 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 RPH3AQ9Y2J0 694 aaPredicted RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 ARL5AQ9Y689 179 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 DNAJC13O75165 2243 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 IGLV3-12A0A075B6K2 115 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 IGHV1-45A0A0A0MS14 117 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 C5orf60A6NFR6 353 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 FAM227AF5H4B4 570 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 APOL1O14791 398 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 PROSCO94903 275 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 AP2A1O95782 977 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 TSPAN12O95859 305 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 TPBGLP0DKB5 382 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 SKILP12757 684 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 ABOP16442 354 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 MAGP20916 626 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 CD68P34810 354 aaPredicted RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 EMP2P54851 167 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 TAS2R40P59535 323 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 XIAPP98170 497 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 PMP22Q01453 160 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 ALDH6A1Q02252 535 aaKnown RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 SNX20Q7Z614 316 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 DOLPP1Q86YN1 238 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 OR5K2Q8NHB8 316 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 RAPGEF5Q92565 580 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 MRFAP1L1Q96HT8 127 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 FCRL5Q96RD9 977 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 C19orf43Q9BQ61 176 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 DLL4Q9NR61 685 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 LCMT1Q9UIC8 334 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 FKBPLQ9UIM3 349 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 MKL2Q9ULH7 1088 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 TDRKHQ9Y2W6 561 aaKnown RBP11.03□□□□□ -0.64
RNF4-216ENST00000511859 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.03□□□□□ -0.64
RNF4-216ENST00000511859 MAU2Q9Y6X3 613 aa11.03□□□□□ -0.64
RNF4-216ENST00000511859 COL6A5A8TX70 2615 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 PRRG2O14669 202 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 LIN7AO14910 233 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms