RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SEPHS1P49903 392 aa8.83□□□□□ -1
NUP54-207ENST00000508583 MAPK10P53779 464 aa8.83□□□□□ -1
NUP54-207ENST00000508583 PCBP4P57723 403 aaKnown RBP8.83□□□□□ -1
NUP54-207ENST00000508583 ABATP80404 500 aa8.83□□□□□ -1
NUP54-207ENST00000508583 CDKL1Q00532 357 aa8.83□□□□□ -1
NUP54-207ENST00000508583 TIAL1Q01085 375 aaKnown RBP eCLIP8.83□□□□□ -1
NUP54-207ENST00000508583 TUBB3Q13509 450 aa8.83□□□□□ -1
NUP54-207ENST00000508583 EFTUD2Q15029 972 aaKnown RBP eCLIP8.83□□□□□ -1
NUP54-207ENST00000508583 SF1Q15637 639 aaKnown RBP8.83□□□□□ -1
NUP54-207ENST00000508583 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.83□□□□□ -1
NUP54-207ENST00000508583 CDKL4Q5MAI5 379 aa8.83□□□□□ -1
NUP54-207ENST00000508583 THEMIS2Q5TEJ8 643 aa8.83□□□□□ -1
NUP54-207ENST00000508583 MROH9Q5TGP6 573 aa8.83□□□□□ -1
NUP54-207ENST00000508583 CYHR1Q6ZMK1 362 aa8.83□□□□□ -1
NUP54-207ENST00000508583 CLEC14AQ86T13 490 aa8.83□□□□□ -1
NUP54-207ENST00000508583 PPP1R3BQ86XI6 285 aa8.83□□□□□ -1
NUP54-207ENST00000508583 TCAIMQ8N3R3 496 aa8.83□□□□□ -1
NUP54-207ENST00000508583 D2HGDHQ8N465 521 aa8.83□□□□□ -1
NUP54-207ENST00000508583 C19orf47Q8N9M1 422 aaKnown RBP8.83□□□□□ -1
NUP54-207ENST00000508583 LMNTD1Q8N9Z9 388 aa8.83□□□□□ -1
NUP54-207ENST00000508583 DENND1AQ8TEH3 1009 aa8.83□□□□□ -1
NUP54-207ENST00000508583 FGF11Q92914 225 aa8.83□□□□□ -1
NUP54-207ENST00000508583 ZUFSPQ96AP4 578 aa8.83□□□□□ -1
NUP54-207ENST00000508583 CABS1Q96KC9 395 aa8.83□□□□□ -1
NUP54-207ENST00000508583 OR2A14Q96R47 310 aa8.83□□□□□ -1
NUP54-207ENST00000508583 PKP4Q99569 1192 aa8.83□□□□□ -1
NUP54-207ENST00000508583 MENTQ9BUN1 341 aa8.83□□□□□ -1
NUP54-207ENST00000508583 TXLNGYQ9BZA5 131 aa8.83□□□□□ -1
NUP54-207ENST00000508583 CNOT10Q9H9A5 744 aaKnown RBP8.83□□□□□ -1
NUP54-207ENST00000508583 NMRAL1Q9HBL8 299 aa8.83□□□□□ -1
NUP54-207ENST00000508583 CCDC177Q9NQR7 707 aaPredicted RBP8.83□□□□□ -1
NUP54-207ENST00000508583 ANKMY1Q9P2S6 941 aa8.83□□□□□ -1
NUP54-207ENST00000508583 PSMC3IPQ9P2W1 217 aaPredicted RBP8.83□□□□□ -1
NUP54-207ENST00000508583 ACOT9Q9Y305 439 aa8.83□□□□□ -1
NUP54-207ENST00000508583 KIF26BQ2KJY2 2108 aa8.83□□□□□ -1
NUP54-207ENST00000508583 TARM1B6A8C7 271 aa8.82□□□□□ -1
NUP54-207ENST00000508583 STMND1H3BQB6 276 aa8.82□□□□□ -1
NUP54-207ENST00000508583 ERLIN1O75477 346 aa8.82□□□□□ -1
NUP54-207ENST00000508583 IPO13O94829 963 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 S100BP04271 92 aaPredicted RBP8.82□□□□□ -1
NUP54-207ENST00000508583 ANXA5P08758 320 aa8.82□□□□□ -1
NUP54-207ENST00000508583 SNRPAP09012 282 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 LTA4HP09960 611 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 FAM153BP0C7A2 387 aa8.82□□□□□ -1
NUP54-207ENST00000508583 CCDC166P0CW27 439 aa8.82□□□□□ -1
NUP54-207ENST00000508583 FGF3P11487 239 aaPredicted RBP8.82□□□□□ -1
NUP54-207ENST00000508583 ATP1A2P50993 1020 aa8.82□□□□□ -1
NUP54-207ENST00000508583 PPP1CAP62136 330 aa8.82□□□□□ -1
NUP54-207ENST00000508583 VSNL1P62760 191 aa8.82□□□□□ -1
NUP54-207ENST00000508583 FOXM1Q08050 763 aa8.82□□□□□ -1
NUP54-207ENST00000508583 CYP4F3Q08477 520 aa8.82□□□□□ -1
NUP54-207ENST00000508583 TSTA3Q13630 321 aaPredicted RBP8.82□□□□□ -1
NUP54-207ENST00000508583 GRB7Q14451 532 aa8.82□□□□□ -1
NUP54-207ENST00000508583 SLC29A2Q14542 456 aa8.82□□□□□ -1
NUP54-207ENST00000508583 FAM153CQ494X1 144 aa8.82□□□□□ -1
NUP54-207ENST00000508583 ZC3H12BQ5HYM0 836 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 CAPN13Q6MZZ7 669 aaPredicted RBP8.82□□□□□ -1
NUP54-207ENST00000508583 LCA5Q86VQ0 697 aa8.82□□□□□ -1
NUP54-207ENST00000508583 RASGRP3Q8IV61 690 aa8.82□□□□□ -1
NUP54-207ENST00000508583 CEP97Q8IW35 865 aa8.82□□□□□ -1
NUP54-207ENST00000508583 GPR135Q8IZ08 494 aa8.82□□□□□ -1
NUP54-207ENST00000508583 LINC01555Q8NAE3 123 aa8.82□□□□□ -1
NUP54-207ENST00000508583 KDF1Q8NAX2 398 aaPredicted RBP8.82□□□□□ -1
NUP54-207ENST00000508583 ZNF248Q8NDW4 579 aa8.82□□□□□ -1
NUP54-207ENST00000508583 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 STAG3L4Q8TBR4 150 aa8.82□□□□□ -1
NUP54-207ENST00000508583 ZCCHC14Q8WYQ9 949 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 USP7Q93009 1102 aa8.82□□□□□ -1
NUP54-207ENST00000508583 FBXL8Q96CD0 374 aa8.82□□□□□ -1
NUP54-207ENST00000508583 MRRFQ96E11 262 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 OR6C1Q96RD1 312 aa8.82□□□□□ -1
NUP54-207ENST00000508583 MIPEPQ99797 713 aa8.82□□□□□ -1
NUP54-207ENST00000508583 HAUS8Q9BT25 410 aa8.82□□□□□ -1
NUP54-207ENST00000508583 TWSG1Q9GZX9 223 aa8.82□□□□□ -1
NUP54-207ENST00000508583 CAB39LQ9H9S4 337 aa8.82□□□□□ -1
NUP54-207ENST00000508583 MRPS30Q9NP92 439 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 ASCL3Q9NQ33 180 aa8.82□□□□□ -1
NUP54-207ENST00000508583 SNX15Q9NRS6 342 aa8.82□□□□□ -1
NUP54-207ENST00000508583 SIDT1Q9NXL6 827 aaKnown RBP8.82□□□□□ -1
NUP54-207ENST00000508583 SERTAD3Q9UJW9 196 aa8.82□□□□□ -1
NUP54-207ENST00000508583 ACSL6Q9UKU0 697 aa8.82□□□□□ -1
NUP54-207ENST00000508583 RARRES3Q9UL19 164 aa8.82□□□□□ -1
NUP54-207ENST00000508583 PDE10AQ9Y233 779 aa8.82□□□□□ -1
NUP54-207ENST00000508583 OARD1Q9Y530 152 aa8.82□□□□□ -1
NUP54-207ENST00000508583 ACACAQ13085 2346 aa8.82□□□□□ -1
NUP54-207ENST00000508583 TPRP12270 2363 aaKnown RBP8.81□□□□□ -1
NUP54-207ENST00000508583 A0A096LPK6 155 aa8.81□□□□□ -1
NUP54-207ENST00000508583 SLC9B1P1A6NJY1 282 aa8.81□□□□□ -1
NUP54-207ENST00000508583 C1QTNF9BB2RNN3 333 aa8.81□□□□□ -1
NUP54-207ENST00000508583 E7ENX8 843 aa8.81□□□□□ -1
NUP54-207ENST00000508583 PHGDHO43175 533 aaKnown RBP8.81□□□□□ -1
NUP54-207ENST00000508583 KIF1CO43896 1103 aaKnown RBP8.81□□□□□ -1
NUP54-207ENST00000508583 FAM155BO75949 473 aa8.81□□□□□ -1
NUP54-207ENST00000508583 WISP3O95389 354 aaPredicted RBP8.81□□□□□ -1
NUP54-207ENST00000508583 MT-ND3P03897 115 aa8.81□□□□□ -1
NUP54-207ENST00000508583 HBQ1P09105 142 aa8.81□□□□□ -1
NUP54-207ENST00000508583 C1QTNF9P0C862 333 aa8.81□□□□□ -1
NUP54-207ENST00000508583 SLC35E2BP0CK96 405 aa8.81□□□□□ -1
NUP54-207ENST00000508583 FGF5P12034 268 aa8.81□□□□□ -1
NUP54-207ENST00000508583 COL6A2P12110 1019 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms