RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZNF140P52738 457 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-211ENST00000508546 SMSP52788 366 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 CASP6P55212 293 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 FAM214AQ32MH5 1076 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 ODF2Q5BJF6 829 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 ZC3H12BQ5HYM0 836 aaKnown RBP8.98□□□□□ -0.97
NEDD9-211ENST00000508546 MFSD7Q6UXD7 560 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 SHISA6Q6ZSJ9 500 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 TAOK1Q7L7X3 1001 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 NLRP9Q7RTR0 991 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 ACBD4Q8NC06 268 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 OR13C4Q8NGS5 318 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 CCDC110Q8TBZ0 833 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.98□□□□□ -0.97
NEDD9-211ENST00000508546 MTFMTQ96DP5 389 aaKnown RBP8.98□□□□□ -0.97
NEDD9-211ENST00000508546 IQCDQ96DY2 449 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 SPOCK3Q9BQ16 436 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 CRB3Q9BUF7 120 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 PACSIN1Q9BY11 444 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 RNF32Q9H0A6 362 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 FAM96AQ9H5X1 160 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 ZNF160Q9HCG1 818 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 LUC7LQ9NQ29 371 aaKnown RBP8.98□□□□□ -0.97
NEDD9-211ENST00000508546 DDX56Q9NY93 547 aaKnown RBP8.98□□□□□ -0.97
NEDD9-211ENST00000508546 PTGFRNQ9P2B2 879 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 RSPH14Q9UHP6 348 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 CAPN11Q9UMQ6 739 aa8.98□□□□□ -0.97
NEDD9-211ENST00000508546 MRPS2Q9Y399 296 aaKnown RBP8.98□□□□□ -0.97
NEDD9-211ENST00000508546 MAP1AP78559 2803 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-211ENST00000508546 FITM1A5D6W6 292 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 HACD1B0YJ81 288 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 H7C0S8 307 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 C19orf84I3L1E1 186 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 QSOX1O00391 747 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 CST8O60676 142 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 SLC19A2O60779 497 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 AP2A2O94973 939 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 BMP10O95393 424 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 CLDN14O95500 239 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 SERPINA7P05543 415 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 ZGLP1P0C6A0 271 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 TMEM253P0C7T8 217 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 MYBL2P10244 700 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 KIR3DL1P43629 444 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 OR1D4P47884 311 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 CDKN1CP49918 316 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-211ENST00000508546 PLOD1Q02809 727 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-211ENST00000508546 OCA2Q04671 838 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 KLC1Q07866 573 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 SLC18A3Q16572 532 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 RIPOR1Q6ZS17 1223 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 NDUFAF7Q7L592 441 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 SERPINA9Q86WD7 417 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 CLDN19Q8N6F1 224 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 TTC29Q8NA56 475 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-211ENST00000508546 SLC35G2Q8TBE7 412 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 STT3BQ8TCJ2 826 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 BRIX1Q8TDN6 353 aaKnown RBP8.97□□□□□ -0.97
NEDD9-211ENST00000508546 P3H4Q92791 437 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 SLC22A18Q96BI1 424 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 QKIQ96PU8 341 aaKnown RBP eCLIP8.97□□□□□ -0.975e-9■■■■■ 30.6
NEDD9-211ENST00000508546 GORASP1Q9BQQ3 440 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 MESP1Q9BRJ9 268 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 ENKD1Q9H0I2 346 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 GBA3Q9H227 469 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 MCCC2Q9HCC0 563 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 INTS7Q9NVH2 962 aaKnown RBP8.97□□□□□ -0.97
NEDD9-211ENST00000508546 PLA2G3Q9NZ20 509 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 TDRKHQ9Y2W6 561 aaKnown RBP8.97□□□□□ -0.97
NEDD9-211ENST00000508546 NEU2Q9Y3R4 380 aa8.97□□□□□ -0.97
NEDD9-211ENST00000508546 AKAP6Q13023 2319 aa8.96□□□□□ -0.97
NEDD9-211ENST00000508546 IGLV3-12A0A075B6K2 115 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 NSG1A0A0A6YYJ2 146 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 SLC5A10A0PJK1 596 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 FKBP9O95302 570 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 S1PR4O95977 384 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 SERPINC1P01008 464 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 ESRRAP11474 423 aaPredicted RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 COX6A1P12074 109 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 MCM3P25205 808 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 PKLRP30613 574 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 MC4RP32245 332 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 NSG1P42857 185 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 SLC1A1P43005 524 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 RAB28P51157 221 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 TLE4Q04727 773 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 CACNG1Q06432 222 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 C3AR1Q16581 482 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 ITPRIPL1Q6GPH6 555 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 PRMT9Q6P2P2 845 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 FIGLAQ6QHK4 219 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 Q6ZPB1 254 aaPredicted RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 CXXC5Q7LFL8 322 aaKnown RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 LUZP1Q86V48 1076 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 PRIMA1Q86XR5 153 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 TGIF2LYQ8IUE0 185 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 TMTC1Q8IUR5 882 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 CEP97Q8IW35 865 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 SIRT6Q8N6T7 355 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 LINC01555Q8NAE3 123 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms