RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CHIT1Q13231 466 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 UBAP2LQ14157 1087 aaKnown RBP23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 GRB7Q14451 532 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 CLCA4Q14CN2 919 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 RPE65Q16518 533 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 CYP2A13Q16696 494 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 XKR7Q5GH72 579 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 CPSF7Q8N684 471 aaKnown RBP23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 PRR11Q96HE9 360 aaPredicted RBP23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 NSL1Q96IY1 281 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 HSPA12BQ96MM6 686 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 AKTIPQ9H8T0 292 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 CAPN14A8MX76 684 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 ULK1O75385 1050 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 LBPP18428 481 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 CALB2P22676 271 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 EIF2B5Q13144 721 aaKnown RBP23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 PRKG2Q13237 762 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 FZD2Q14332 565 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 XKR6Q5GH73 641 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 CHSY3Q70JA7 882 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 LRRC56Q8IYG6 542 aaPredicted RBP23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 DEFB119Q8N690 84 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 C3orf30Q96M34 536 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 CAMK1GQ96NX5 476 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 TBC1D29Q9UFV1 150 aa23.64■■□□□ 1.37
PPP1R3F-205ENST00000495799 SCAMP1O15126 338 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 RGS14O43566 566 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 DCXO43602 365 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 CTSEP14091 401 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 SLC2A4P14672 509 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 JUPP14923 745 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 AK4P27144 223 aaPredicted RBP23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 SCTRP47872 440 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 ATP4BP51164 291 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 TSTA3Q13630 321 aaPredicted RBP23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 WDR45BQ5MNZ6 344 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 PRAMEF14Q5SWL7 426 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 THEMIS2Q5TEJ8 643 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 PRAMEF13Q5VWM6 474 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 DUS1LQ6P1R4 473 aaKnown RBP23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 SLC30A9Q6PML9 568 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 LCTLQ6UWM7 567 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 SPATA19Q7Z5L4 167 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 C11orf74Q86VG3 221 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 GPBAR1Q8TDU6 330 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 SMPDL3AQ92484 453 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 CATSPER2Q96P56 530 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 DUSP15Q9H1R2 295 aaPredicted RBP23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 ELOVL6Q9H5J4 265 aa23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 PRMT8Q9NR22 394 aaPredicted RBP23.63■■□□□ 1.37
PPP1R3F-205ENST00000495799 ATP6AP2A0A1C7CYW4 349 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 PRR5-ARHGAP8B1AHC4 643 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 MANBAO00462 879 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 LAMTOR5O43504 91 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 ATP6AP2O75787 350 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 ESRRAP11474 423 aaPredicted RBP23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 F3P13726 295 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 EZRP15311 586 aaKnown RBP23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 PRDX6P30041 224 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 CASP2P42575 452 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 RAB28P51157 221 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 STX1BP61266 288 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 SQLEQ14534 574 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 CPSF6Q16630 551 aaKnown RBP eCLIP23.62■■□□□ 1.378e-9■■■■□ 19.3
PPP1R3F-205ENST00000495799 ATP6AP1LQ52LC2 224 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 GRHL2Q6ISB3 625 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 OGFOD2Q6N063 350 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 WDR5BQ86VZ2 330 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 PHACTR4Q8IZ21 702 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 USP7Q93009 1102 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 CMTM5Q96DZ9 223 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 OR4K3Q96R72 315 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 MIR1-1HGQ9H1L0 117 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 EHD1Q9H4M9 534 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 ZNF385DQ9H6B1 395 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 KIR3DX1Q9H7L2 352 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 TAGLN3Q9UI15 199 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 PNMA8BQ9ULN7 279 aaPredicted RBP23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 PLAGL1Q9UM63 463 aa23.62■■□□□ 1.37
PPP1R3F-205ENST00000495799 CEP192Q8TEP8 1941 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 KCNE1BA0A087WTH5 132 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 A0A1W2PR77 199 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 E7EQ34 232 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 FFAR3O14843 346 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 GPR42O15529 346 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 WFS1O76024 890 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 PDGFBP01127 241 aaPredicted RBP23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 PAGE2BQ5JRK9 111 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 HMGCLL1Q8TB92 370 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 CXorf40BQ96DE9 158 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 PTCD3Q96EY7 689 aaKnown RBP23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 PPP3R2Q96LZ3 170 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 IL17FQ96PD4 163 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 TM9SF3Q9HD45 589 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 ARL8BQ9NVJ2 186 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 ZNF490Q9ULM2 529 aaPredicted RBP23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 PTGDR2Q9Y5Y4 395 aa23.61■■□□□ 1.37
PPP1R3F-205ENST00000495799 EML5Q05BV3 1969 aa23.6■■□□□ 1.37
PPP1R3F-205ENST00000495799 OR5K4A6NMS3 321 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms