RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 DNAJB13P59910 316 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 TAP2Q03519 686 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 ASPHQ12797 758 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 NR0B2Q15466 257 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 PDK4Q16654 411 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 CYP2A13Q16696 494 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 CDKL4Q5MAI5 379 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 FAM219BQ5XKK7 198 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 GOLGA7Q7Z5G4 137 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 AVL9Q8NBF6 648 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 OR2L8Q8NGY9 312 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 LRRC8CQ8TDW0 803 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 GSTO2Q9H4Y5 243 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 MANSC1Q9H8J5 431 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 ZNF395Q9H8N7 513 aaPredicted RBP18.76■□□□□ 0.59
USP39-218ENST00000493829 SPHK1Q9NYA1 384 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 PADI4Q9UM07 663 aa18.76■□□□□ 0.59
USP39-218ENST00000493829 TNPO3Q9Y5L0 923 aaKnown RBP18.76■□□□□ 0.59
USP39-218ENST00000493829 CPED1A4D0V7 1026 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 BTN3A3O00478 584 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 SERPINE1P05121 402 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 ZNF883P0CG24 379 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 BST1Q10588 318 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 PCBP2Q15366 365 aaKnown RBP eCLIP18.75■□□□□ 0.59
USP39-218ENST00000493829 RBBP7Q16576 425 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 CAPN13Q6MZZ7 669 aaPredicted RBP18.75■□□□□ 0.59
USP39-218ENST00000493829 GUSBP11Q6P575 273 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 THOC6Q86W42 341 aaKnown RBP18.75■□□□□ 0.59
USP39-218ENST00000493829 LRRC56Q8IYG6 542 aaPredicted RBP18.75■□□□□ 0.59
USP39-218ENST00000493829 DCBLD1Q8N8Z6 715 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 Q8N9G6 341 aaPredicted RBP18.75■□□□□ 0.59
USP39-218ENST00000493829 OR56A3Q8NH54 315 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 CKAP2Q8WWK9 683 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 ZNF75CPQ92670 426 aaPredicted RBP18.75■□□□□ 0.59
USP39-218ENST00000493829 RSC1A1Q92681 617 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 INTS7Q9NVH2 962 aaKnown RBP18.75■□□□□ 0.59
USP39-218ENST00000493829 OGFRQ9NZT2 677 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 TAC3Q9UHF0 121 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 SH2B3Q9UQQ2 575 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 CABIN1Q9Y6J0 2220 aa18.75■□□□□ 0.59
USP39-218ENST00000493829 LY6G6EA0A0G2JKS1 128 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 GSAPA4D1B5 854 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 ZNF839A8K0R7 811 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 K7EPI3 171 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 GDF9O60383 454 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 CHRNGP07510 517 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 CHRM5P08912 532 aaPredicted RBP18.74■□□□□ 0.59
USP39-218ENST00000493829 POLR2CP19387 275 aaPredicted RBP18.74■□□□□ 0.59
USP39-218ENST00000493829 ALDH4A1P30038 563 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 ARRB2P32121 409 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 GGT5P36269 586 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 GTF2H2Q13888 395 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 ARHGAP19Q14CB8 494 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 SUZ12Q15022 739 aaKnown RBP18.74■□□□□ 0.59
USP39-218ENST00000493829 PRAMEF13Q5VWM6 474 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 GTF2H2CQ6P1K8 395 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 FRMD7Q6ZUT3 714 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 LRRC70Q7Z2Q7 622 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 FAM20CQ8IXL6 584 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 RBM12BQ8IXT5 1001 aaKnown RBP18.74■□□□□ 0.59
USP39-218ENST00000493829 TRPC4APQ8TEL6 797 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 ZNF483Q8TF39 744 aaPredicted RBP18.74■□□□□ 0.59
USP39-218ENST00000493829 SMPDL3AQ92484 453 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 CCDC74AQ96AQ1 378 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 OR4K3Q96R72 315 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 ZMYND15Q9H091 742 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 DNAJC11Q9NVH1 559 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 U3KQA8 63 aa18.74■□□□□ 0.59
USP39-218ENST00000493829 C4orf47A7E2U8 309 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 ISM1B1AKI9 464 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 PPP6CO00743 305 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 ITM2AO43736 263 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 LRP3O75074 770 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 PEBP1P30086 187 aaKnown RBP18.73■□□□□ 0.59
USP39-218ENST00000493829 HSD17B2P37059 387 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 GRK6P43250 576 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 OR1D5P58170 312 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 DAB2P98082 770 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 STX3Q13277 289 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 INAVAQ3KP66 663 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 NKAIN2Q5VXU1 208 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 ASCL5Q7RTU5 278 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 ADGRF3Q8IZF5 1079 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 AGR3Q8TD06 166 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 ZFPM2Q8WW38 1151 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 MAGEB18Q96M61 343 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 SLC32A1Q9H598 525 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 KCNK4Q9NYG8 393 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 OTOGLQ3ZCN5 2332 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 A0A1W2PPV9 198 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 CASC3O15234 703 aaKnown RBP18.73■□□□□ 0.59
USP39-218ENST00000493829 NUDT21O43809 227 aaKnown RBP18.73■□□□□ 0.59
USP39-218ENST00000493829 H2AFYO75367 372 aaKnown RBP18.73■□□□□ 0.59
USP39-218ENST00000493829 HSPA4LO95757 839 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 GLB1P16278 677 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 TGM1P22735 817 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 PPP1CAP62136 330 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 YBX1P67809 324 aaKnown RBP18.73■□□□□ 0.59
USP39-218ENST00000493829 NHLH1Q02575 133 aa18.73■□□□□ 0.59
USP39-218ENST00000493829 CLCQ05315 142 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms