RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 CILP2Q8IUL8 1156 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 TRIM48Q8IWZ4 208 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 RAVER1Q8IY67 606 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 CNPY4Q8N129 248 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 ACVR1CQ8NER5 493 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 GDAP1Q8TB36 358 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 TCP10LQ8TDR4 215 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 DENND1AQ8TEH3 1009 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 KLHL6Q8WZ60 621 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 SH3KBP1Q96B97 665 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 APOPT1Q96IL0 206 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 VPS35Q96QK1 796 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 SRPK1Q96SB4 655 aaKnown RBP9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 GPR22Q99680 433 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 DPYSL5Q9BPU6 564 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 CAB39LQ9H9S4 337 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 SNX15Q9NRS6 342 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 CATSPERZQ9NTU4 200 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 PSD3Q9NYI0 1048 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 LNPEPQ9UIQ6 1025 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 PKP3Q9Y446 797 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 KCNMB2Q9Y691 235 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 FLNCQ14315 2725 aa9.92□□□□□ -0.82
SOX2-OT-215ENST00000493521 DOPEY2Q9Y3R5 2298 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SPTBP11277 2137 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 FAM95CA0A1B0GW59 222 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 CDC14CA4D256 554 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 OR5K4A6NMS3 321 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 MASP2O00187 686 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 ZW10O43264 779 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SHOX2O60902 331 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 ZWINTO95229 277 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 S1PR4O95977 384 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 CTSBP07858 339 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 RNF224P0DH78 156 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 NELFEP18615 380 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 TCN2P20062 427 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 OGNP20774 298 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SAT1P21673 171 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 TYK2P29597 1187 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SPAM1P38567 509 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 HADHAP40939 763 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 MAGEA12P43365 314 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 UQCRFS1P47985 274 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 MLLT10P55197 1068 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 WDR4P57081 412 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 FOXK1P85037 733 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 XIAPP98170 497 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 PEX6Q13608 980 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 IL10RAQ13651 578 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SEMA3AQ14563 771 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 USP10Q14694 798 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 TERF2Q15554 542 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 GPR19Q15760 415 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 MRNIPQ6NTE8 343 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 CNSTQ6PJW8 725 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 C6orf15Q6UXA7 325 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 PRSS42Q7Z5A4 293 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 CMC1Q7Z7K0 106 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 GALNT7Q86SF2 657 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SDCCAG8Q86SQ7 713 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 TAX1BP1Q86VP1 789 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 PLXDC1Q8IUK5 500 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 RASGRP3Q8IV61 690 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 LMNTD1Q8N9Z9 388 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 DDHD1Q8NEL9 900 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 C9orf43Q8TAL5 461 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 ACMSDQ8TDX5 336 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 DYDC1Q8WWB3 177 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 ISL2Q96A47 359 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 CXorf40BQ96DE9 158 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SGSM3Q96HU1 749 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 RMDN2Q96LZ7 410 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 TEFMQ96QE5 360 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 KLHL25Q9H0H3 589 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 WWP1Q9H0M0 922 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 VPS11Q9H270 941 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 C12orf65Q9H3J6 166 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 STN1Q9H668 368 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 UCK1Q9HA47 277 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SLC17A7Q9P2U7 560 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 SLC39A10Q9ULF5 831 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 MED13Q9UHV7 2174 aa9.91□□□□□ -0.82
SOX2-OT-215ENST00000493521 GLYATL1P3A0A0U1RQE8 302 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 H7C0S8 307 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 TM9SF1O15321 606 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 HCRTR1O43613 425 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 VEGFDO43915 354 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 FGF5P12034 268 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 IDSP22304 550 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 FOXN2P32314 431 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 LSP1P33241 339 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 CRHR1P34998 444 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 CCT5P48643 541 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 KPNA2P52292 529 aaKnown RBP9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 TYSND1Q2T9J0 566 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 ZRANB3Q5FWF4 1079 aa9.9□□□□□ -0.82
SOX2-OT-215ENST00000493521 RBM20Q5T481 1227 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms