RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 ZNF140P52738 457 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 RPA4Q13156 261 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 KAZNQ674X7 775 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 KIRREL2Q6UWL6 708 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 SNX20Q7Z614 316 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 DMRTC2Q8IXT2 367 aaPredicted RBP11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 OR5AR1Q8NGP9 310 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 PHF10Q8WUB8 498 aaKnown RBP11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 HEXDCQ8WVB3 486 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 TMEM158Q8WZ71 300 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 CNDP1Q96KN2 507 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 QKIQ96PU8 341 aaKnown RBP eCLIP11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 TAAR6Q96RI8 345 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 APOL2Q9BQE5 337 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 EPS8L2Q9H6S3 715 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 ZDHHC3Q9NYG2 299 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 ABI3Q9P2A4 366 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 RSPH14Q9UHP6 348 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 TRHDEQ9UKU6 1024 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 PLCL2Q9UPR0 1127 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 HS3ST3B1Q9Y662 390 aa11.21□□□□□ -0.61
CACNA1C-228ENST00000492150 SNRNP200O75643 2136 aaKnown RBP11.21□□□□□ -0.62
CACNA1C-228ENST00000492150 TRBV5-4A0A0C4DH59 114 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 CCL22O00626 93 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 ZWINTO95229 277 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 MBD3O95983 291 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 PRSS56P0CW18 603 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 ITGALP20701 1170 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 PEBP1P30086 187 aaKnown RBP11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 SHMT2P34897 504 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 GEMP55040 296 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 UBASH3AP57075 661 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 C3AR1Q16581 482 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 NKG7Q16617 165 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 ODF2Q5BJF6 829 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 Q6ZPB1 254 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 COX15Q7KZN9 410 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 OVCH1Q7RTY7 1134 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 SERPINA9Q86WD7 417 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 CLDN19Q8N6F1 224 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 CATSPER1Q8NEC5 780 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 CA5BP1Q8WTZ4 195 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 P3H4Q92791 437 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 FKBP10Q96AY3 582 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 HAUS1Q96CS2 278 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 SPSB2Q99619 263 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 NDC1Q9BTX1 674 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 LHPPQ9H008 270 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 GBA3Q9H227 469 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 C10orf88Q9H8K7 445 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 ZNF358Q9NW07 568 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 DNAJB12Q9NXW2 375 aaKnown RBP11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 EURLQ9NYK6 297 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 CDC23Q9UJX2 597 aa11.2□□□□□ -0.62
CACNA1C-228ENST00000492150 HACD1B0YJ81 288 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 INAFM1C9JVW0 142 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 ANXA9O76027 345 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 KLHL18O94889 574 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 COMTP21964 271 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 ALAS2P22557 587 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 ACRV1P26436 265 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 ACADLP28330 430 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 MC4RP32245 332 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 SLC1A1P43005 524 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 SLC5A12Q1EHB4 618 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 GPR33Q49SQ1 333 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 DENND5AQ6IQ26 1287 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 ZNF449Q6P9G9 518 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 TTLL10Q6ZVT0 673 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 FAM20CQ8IXL6 584 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 SIMC1Q8NDZ2 872 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 THOC3Q96J01 351 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 COX4I2Q96KJ9 171 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 GBP4Q96PP9 640 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 C19orf43Q9BQ61 176 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 MESP1Q9BRJ9 268 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 SLC26A1Q9H2B4 701 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 LIME1Q9H400 295 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 WDR54Q9H977 334 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 VPS37BQ9H9H4 285 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 IRAK4Q9NWZ3 460 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 STMN3Q9NZ72 180 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 OR6C2Q9NZP2 312 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 TINAGQ9UJW2 476 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 PLAGL1Q9UM63 463 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 ASF1AQ9Y294 204 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 PLEKHA6Q9Y2H5 1048 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 KLHL20Q9Y2M5 609 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 ZNF835Q9Y2P0 537 aa11.19□□□□□ -0.62
CACNA1C-228ENST00000492150 SONP18583 2426 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 hCG_1818297A0A087WSY0 165 aa11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 A0A1B0GX78 115 aa11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 CRTAMO95727 393 aa11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 ALBP02768 609 aa11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 GSTM1P09488 218 aa11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 RBL1P28749 1068 aa11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 DGKQP52824 942 aa11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 GSTM4Q03013 218 aa11.18□□□□□ -0.62
CACNA1C-228ENST00000492150 MFAP5Q13361 173 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms