RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ZBTB20Q9HC78 741 aaPredicted RBP17.06■□□□□ 0.32
YIPF3-208ENST00000490447 SLC6A20Q9NP91 592 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 SLC22A11Q9NSA0 550 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 CATSPERZQ9NTU4 200 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 NXT1Q9UKK6 140 aaKnown RBP17.06■□□□□ 0.32
YIPF3-208ENST00000490447 ZNF148Q9UQR1 794 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 TCAF1Q9Y4C2 921 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 PCDHGA10Q9Y5H3 936 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 MRFAP1Q9Y605 127 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 PIKFYVEQ9Y2I7 2098 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 SEC16AO15027 2179 aa17.06■□□□□ 0.32
YIPF3-208ENST00000490447 IQCF5A8MTL0 148 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 GPC4O75487 556 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 LDLRP01130 860 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 ITGAXP20702 1163 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 GRIA3P42263 894 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 TTPAP49638 278 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 ACVR1Q04771 509 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 NKG7Q16617 165 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 FAM214AQ32MH5 1076 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 AGAP7PQ5VUJ5 663 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 PTRHD1Q6GMV3 140 aaKnown RBP17.05■□□□□ 0.32
YIPF3-208ENST00000490447 FIGLAQ6QHK4 219 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 ZNF534Q76KX8 674 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 CUZD1Q86UP6 607 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 CCDC89Q8N998 374 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 PPP4R1Q8TF05 950 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 COG1Q8WTW3 980 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 INPP5DQ92835 1189 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 PEX13Q92968 403 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 ZNF778Q96MU6 729 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 AGAP4Q96P64 663 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 PANX3Q96QZ0 392 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 BAG1Q99933 345 aaPredicted RBP17.05■□□□□ 0.32
YIPF3-208ENST00000490447 MENTQ9BUN1 341 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 FRMD8P1Q9BZ68 369 aaPredicted RBP17.05■□□□□ 0.32
YIPF3-208ENST00000490447 SOX17Q9H6I2 414 aaPredicted RBP17.05■□□□□ 0.32
YIPF3-208ENST00000490447 EPS8L2Q9H6S3 715 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 RAB6BQ9NRW1 208 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 IL1RAPL1Q9NZN1 696 aa17.05■□□□□ 0.32
YIPF3-208ENST00000490447 PRMT5O14744 637 aaPredicted RBP17.04■□□□□ 0.32
YIPF3-208ENST00000490447 LIASO43766 372 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 ALOX12BO75342 701 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 FKBP9O95302 570 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 GRIA1P42261 906 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 GCGRP47871 477 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 SEMA3AQ14563 771 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 RBBP7Q16576 425 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 TUBB8Q3ZCM7 444 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 FCRL6Q6DN72 434 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 SHISA6Q6ZSJ9 500 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 KRT222Q8N1A0 295 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 LMNTD1Q8N9Z9 388 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 LKAAEAR1Q8TD35 194 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 RAD51AP1Q96B01 352 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 HES6Q96HZ4 224 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 SPSB2Q99619 263 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 SLC26A1Q9H2B4 701 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 SEMA3GQ9NS98 782 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 GNPTGQ9UJJ9 305 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 NOVA2Q9UNW9 492 aaKnown RBP17.04■□□□□ 0.32
YIPF3-208ENST00000490447 FAM169AQ9Y6X4 670 aa17.04■□□□□ 0.32
YIPF3-208ENST00000490447 FER1L5A0AVI2 2057 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 WIPF3A6NGB9 483 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 SOCS6O14544 535 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 KPNA5O15131 536 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 CLDN1O95832 211 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 APRTP07741 180 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 MCM3P25205 808 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 COL8A1P27658 744 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 AOAHP28039 575 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 GRB7Q14451 532 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 OASLQ15646 514 aaKnown RBP17.03■□□□□ 0.32
YIPF3-208ENST00000490447 HIF1AQ16665 826 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 ZNF787Q6DD87 383 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 COX15Q7KZN9 410 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 LDB1Q86U70 411 aaPredicted RBP17.03■□□□□ 0.32
YIPF3-208ENST00000490447 TMEM151BQ8IW70 566 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 METTL27Q8N6F8 245 aaPredicted RBP17.03■□□□□ 0.32
YIPF3-208ENST00000490447 ST6GALNAC3Q8NDV1 305 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 DNAJB14Q8TBM8 379 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 ZUFSPQ96AP4 578 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 CNDP1Q96KN2 507 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 FOPNLQ96NB1 174 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 LHPPQ9H008 270 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 PAK5Q9P286 719 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 TTC7AQ9ULT0 858 aaPredicted RBP17.03■□□□□ 0.32
YIPF3-208ENST00000490447 HS3ST3B1Q9Y662 390 aa17.03■□□□□ 0.32
YIPF3-208ENST00000490447 DOPEY1Q5JWR5 2465 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 TARM1B6A8C7 271 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 CD3EAPO15446 510 aaKnown RBP17.02■□□□□ 0.32
YIPF3-208ENST00000490447 SRPX2O60687 465 aaPredicted RBP17.02■□□□□ 0.32
YIPF3-208ENST00000490447 SLCO2B1O94956 709 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 ONECUT2O95948 504 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 OR1D4P47884 311 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 VSX2P58304 361 aaPredicted RBP17.02■□□□□ 0.32
YIPF3-208ENST00000490447 CDC16Q13042 620 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 CRB2Q5IJ48 1285 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 OTOAQ7RTW8 1153 aa17.02■□□□□ 0.32
YIPF3-208ENST00000490447 PARP9Q8IXQ6 854 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms