RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PLCL2Q9UPR0 1127 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 AP1M2Q9Y6Q5 423 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 ITPR1Q14643 2758 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 ARHGEF33A8MVX0 844 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 C21orf140B9A014 251 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 E7ESA3 106 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 OR2B3O76000 313 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 WT1P19544 449 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 MCM3P25205 808 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 PEBP1P30086 187 aaKnown RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 RPA3P35244 121 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 ILF2Q12905 390 aaKnown RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 CYP2A13Q16696 494 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 CCSMST1Q4G0I0 132 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 SOWAHCQ53LP3 525 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 FAM45BPQ6NSW5 357 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 C8orf74Q6P047 294 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 FIGLAQ6QHK4 219 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 UBE2R2Q712K3 238 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 ZNF572Q7Z3I7 529 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 MYO1HQ8N1T3 1032 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 MNS1Q8NEH6 495 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 GIMAP7Q8NHV1 300 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 FLVCR1-AS1Q8TAF5 88 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 HMGCLL1Q8TB92 370 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 FAM45AQ8TCE6 357 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 SMPDL3AQ92484 453 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 STARD8Q92502 1023 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 CDKL2Q92772 493 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 ZUFSPQ96AP4 578 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 SLC30A3Q99726 388 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 SLC12A9Q9BXP2 914 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 TWSG1Q9GZX9 223 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 FAM60AQ9NP50 221 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 SAYSD1Q9NPB0 183 aa13.76□□□□□ -0.21
BRCA1-218ENST00000489037 UTP6Q9NYH9 597 aaKnown RBP13.76□□□□□ -0.21
BRCA1-218ENST00000489037 TARM1B6A8C7 271 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 MYO1CO00159 1063 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 MEN1O00255 615 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 CCNDBP1O95273 360 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 MAGP20916 626 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 AGXTP21549 392 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 CMPK1P30085 196 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 PNLIPRP1P54315 467 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 PLTPP55058 493 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 CYP4F2P78329 520 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 CBLBQ13191 982 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 C16orf46Q6P387 395 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 TLDC1Q6P9B6 456 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 TRMT10BQ6PF06 316 aaKnown RBP13.75□□□□□ -0.21
BRCA1-218ENST00000489037 SLC26A11Q86WA9 606 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 SYTL1Q8IYJ3 562 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 LMNTD1Q8N9Z9 388 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 FBXO15Q8NCQ5 510 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-218ENST00000489037 MCOLN3Q8TDD5 553 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 DENND1AQ8TEH3 1009 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 CT55Q8WUE5 264 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 ASB11Q8WXH4 323 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 SEC14L1Q92503 715 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 TTC9Q92623 222 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 MIPEPQ99797 713 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 GPR87Q9BY21 358 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 TXLNGQ9NUQ3 528 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 TXNDC16Q9P2K2 825 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 IL17BQ9UHF5 180 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 MED16Q9Y2X0 877 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 VWA7Q9Y334 891 aa13.75□□□□□ -0.21
BRCA1-218ENST00000489037 IGSF10Q6WRI0 2623 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 GFYI3L273 518 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 TP73O15350 636 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 NKX2-8O15522 239 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 ZNF749O43361 778 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 C8GP07360 202 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 GSTA2P09210 222 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 HIST1H2AGP0C0S8 130 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 PRKAR1AP10644 381 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 SFTPCP11686 197 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 HIST1H2ADP20671 130 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 GABRB3P28472 473 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 IL2P60568 153 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 GPS2Q13227 327 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 FASTKD3Q14CZ7 662 aaKnown RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 ZIC1Q15915 447 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 DEFB110Q30KQ9 67 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 CRTC2Q53ET0 693 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 RBM20Q5T481 1227 aaKnown RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 HECTD2Q5U5R9 776 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 BORAQ6PGQ7 559 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 PAQR3Q6TCH7 311 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 CYHR1Q6ZMK1 362 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 CAPN12Q6ZSI9 719 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 PIWIL4Q7Z3Z4 852 aaKnown RBP13.74□□□□□ -0.21
BRCA1-218ENST00000489037 STRA8Q7Z7C7 330 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 CCDC25Q86WR0 208 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 FAM20CQ8IXL6 584 aa13.74□□□□□ -0.21
BRCA1-218ENST00000489037 DSELQ8IZU8 1212 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms