RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ZNF789Q5FWF6 425 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 DNTTIP2Q5QJE6 756 aaKnown RBP6.37□□□□□ -1.39
SMC4-217ENST00000485867 TTI2Q6NXR4 508 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 TMEM207Q6UWW9 146 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 ABRAXAS1Q6UWZ7 409 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 MEX3BQ6ZN04 569 aaKnown RBP6.37□□□□□ -1.39
SMC4-217ENST00000485867 ARHGAP36Q6ZRI8 547 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 ARHGEF18Q6ZSZ5 1173 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 PPP1R32Q7Z5V6 425 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 SLFN11Q7Z7L1 901 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 PRIMA1Q86XR5 153 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 ARHGAP12Q8IWW6 846 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 TTC30BQ8N4P2 665 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 SLC16A11Q8NCK7 471 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 NUDT10Q8NFP7 164 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 JOSD2Q8TAC2 188 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 FAM172AQ8WUF8 416 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 PIH1D2Q8WWB5 315 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 CXorf40BQ96DE9 158 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 NUDT11Q96G61 164 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 WWC2-AS2Q96NR7 200 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 NUDCD1Q96RS6 583 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 WDR24Q96S15 920 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 MEGF9Q9H1U4 602 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 PDCL3Q9H2J4 239 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 ACTR5Q9H9F9 607 aaPredicted RBP6.37□□□□□ -1.39
SMC4-217ENST00000485867 BARX1Q9HBU1 254 aaPredicted RBP6.37□□□□□ -1.39
SMC4-217ENST00000485867 NOD2Q9HC29 1040 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 RMND1Q9NWS8 449 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 ATXN10Q9UBB4 475 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 ADAM29Q9UKF5 820 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 CFAP45Q9UL16 551 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 BTRCQ9Y297 605 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMC4-217ENST00000485867 UBA6A0AVT1 1052 aaPredicted RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 FOXN3O00409 490 aaPredicted RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 PSMA7O14818 248 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 MTA2O94776 668 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 UNC5CO95185 931 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 LSM8O95777 96 aaKnown RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 CYP11B1P15538 503 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 ZNF30P17039 623 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 CYP2A7P20853 494 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 RFC1P35251 1148 aaPredicted RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 FOLR3P41439 243 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 SMSP52788 366 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 TPI1P60174 286 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 NOMO3P69849 1222 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 IL10RBQ08334 325 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 AIMP2Q13155 320 aaKnown RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 CYP2A13Q16696 494 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 INSCQ1MX18 579 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 TDRD12Q587J7 1177 aaKnown RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 HENMT1Q5T8I9 393 aaKnown RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 ARMC12Q5T9G4 340 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 AGAP9Q5VTM2 703 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 AGAP7PQ5VUJ5 663 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 TAF3Q5VWG9 929 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 VASNQ6EMK4 673 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 WASH2PQ6VEQ5 465 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 CXXC5Q7LFL8 322 aaKnown RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 FAM71AQ8IYT1 594 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 Q8N1X5 172 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 PGBD5Q8N414 524 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 MSANTD4Q8NCY6 345 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 GPR150Q8NGU9 434 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 OR1L3Q8NH93 324 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 MAGEB10Q96LZ2 347 aaPredicted RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 PPM1MQ96MI6 270 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 AGAP4Q96P64 663 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 TAAR6Q96RI8 345 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 TMEM121Q9BTD3 319 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 TLR10Q9BXR5 811 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 OR2AG1Q9H205 316 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 GOLPH3LQ9H4A5 285 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 EPS8L2Q9H6S3 715 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 FANCEQ9HB96 536 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 SIX2Q9NPC8 291 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 FAM207AQ9NSI2 230 aaPredicted RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 FZD10Q9ULW2 581 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 DNAJC16Q9Y2G8 782 aa6.36□□□□□ -1.39
SMC4-217ENST00000485867 PTRH2Q9Y3E5 179 aaKnown RBP6.36□□□□□ -1.39
SMC4-217ENST00000485867 OR5K3A6NET4 321 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 TMEM150CB9EJG8 249 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 AGPSO00116 658 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 DFFAO00273 331 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 CHUKO15111 745 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 CNOT3O75175 753 aaKnown RBP6.35□□□□□ -1.39
SMC4-217ENST00000485867 ALOX12BO75342 701 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 ZNF202O95125 648 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 KNG1P01042 644 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 FSHBP01225 129 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 UMODP07911 640 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 PDHA1P08559 390 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 ZNF7P17097 686 aaPredicted RBP6.35□□□□□ -1.39
SMC4-217ENST00000485867 IL4RP24394 825 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 MST1P26927 711 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 HTR7P34969 479 aa6.35□□□□□ -1.39
SMC4-217ENST00000485867 HSPA9P38646 679 aaKnown RBP6.35□□□□□ -1.39
SMC4-217ENST00000485867 KPNA2P52292 529 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms