RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CD1BP29016 333 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SHMT1P34896 483 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 PBX1P40424 430 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GPR4P46093 362 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GSTM5P46439 218 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CCR4P51679 360 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 RPS6KA3P51812 740 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SUCLG1P53597 346 aaKnown RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 GALCP54803 685 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 F2RL1P55085 397 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CDH13P55290 713 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GSCP56915 257 aaPredicted RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 RWDD2BP57060 319 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SSTP61278 116 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SIM1P81133 766 aaPredicted RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 ACSM1Q08AH1 577 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ITGB3BPQ13352 177 aaPredicted RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 DLG2Q15700 870 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 DECR1Q16698 335 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 UGP2Q16851 508 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 MTHFSDQ2M296 383 aaKnown RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 DPCR1Q3MIW9 517 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 FAM153CQ494X1 144 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SLC36A3Q495N2 470 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 IQCCQ4KMZ1 466 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 KLHL26Q53HC5 615 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 LBHQ53QV2 105 aaPredicted RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 TMEM196Q5HYL7 178 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CEP78Q5JTW2 689 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 PHYHD1Q5SRE7 291 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 RARS2Q5T160 578 aaKnown RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 KRT79Q5XKE5 535 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 TMEM198Q66K66 360 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CCDC144NLQ6NUI1 221 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CASC4Q6P4E1 433 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ARSKQ6UWY0 536 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GLDNQ6ZMI3 551 aaPredicted RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 CAMK1DQ8IU85 385 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 FAM114A1Q8IWE2 563 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GUF1Q8N442 669 aaKnown RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 PNPLA1Q8N8W4 532 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ASCC1Q8N9N2 400 aaKnown RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 OR52B4Q8NGK2 314 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CCDC26Q8TAB7 109 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CAGE1Q8TC20 777 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 LKAAEAR1Q8TD35 194 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 PSPC1Q8WXF1 523 aaKnown RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 PIBF1Q8WXW3 757 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 DPF1Q92782 380 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 PPP1R14BQ96C90 147 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 EEF2KMTQ96G04 330 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ZBED3Q96IU2 234 aaPredicted RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 ZNF479Q96JC4 524 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 C12orf66Q96MD2 445 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CD180Q99467 661 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SSX3Q99909 188 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 PAAF1Q9BRP4 392 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 C11orf70Q9BRQ4 267 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ABHD6Q9BV23 337 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 OSGEPL1Q9H4B0 414 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 MINDY3Q9H8M7 445 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 MED20Q9H944 212 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ZDHHC18Q9NUE0 388 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 PAG1Q9NWQ8 432 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SLC17A6Q9P2U8 582 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 UXTQ9UBK9 157 aaPredicted RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 PEMTQ9UBM1 199 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 MGAT4CQ9UBM8 478 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SERGEFQ9UGK8 458 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 RAB21Q9UL25 225 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SLC9A8Q9Y2E8 581 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 HBS1LQ9Y450 684 aaKnown RBP4.02□□□□□ -1.77
VPS41-212ENST00000482217 NCAPD2Q15021 1401 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CARMIL1Q5VZK9 1371 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 AOX1Q06278 1338 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 CGB1A6NKQ9 187 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 YDJCA8MPS7 323 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 H0YIG0 161 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 M0QZQ0 153 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ANKRD28O15084 1053 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 CTIFO43310 598 aaKnown RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 TRAPPC3O43617 180 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 HS6ST1O60243 411 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 SNNO75324 88 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 CRTAPO75718 401 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 ZNF189O75820 626 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 SORBS2O94875 1100 aaKnown RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 KDM4BO94953 1096 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 KAT7O95251 611 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 IGFBP1P08833 259 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 ELFN1P0C7U0 828 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ZNF37AP17032 561 aaPredicted RBP4.01□□□□□ -1.77
VPS41-212ENST00000482217 GNAZP19086 355 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 ATP6V1C1P21283 382 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 DRD1P21728 446 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 DRD4P21917 467 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 PRDX6P30041 224 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 PKLRP30613 574 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 OTX2P32243 289 aa4.01□□□□□ -1.77
VPS41-212ENST00000482217 CXCR5P32302 372 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms