RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 FOPNLQ96NB1 174 aa8.78□□□□□ -1
VCP-206ENST00000480327 IL17FQ96PD4 163 aa8.78□□□□□ -1
VCP-206ENST00000480327 TAAR9Q96RI9 348 aa8.78□□□□□ -1
VCP-206ENST00000480327 CCDC77Q9BR77 488 aa8.78□□□□□ -1
VCP-206ENST00000480327 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.78□□□□□ -1
VCP-206ENST00000480327 SLC25A18Q9H1K4 315 aa8.78□□□□□ -1
VCP-206ENST00000480327 TRIT1Q9H3H1 467 aaKnown RBP8.78□□□□□ -1
VCP-206ENST00000480327 KIR3DX1Q9H7L2 352 aa8.78□□□□□ -1
VCP-206ENST00000480327 MVB12BQ9H7P6 319 aa8.78□□□□□ -1
VCP-206ENST00000480327 GPAMQ9HCL2 828 aa8.78□□□□□ -1
VCP-206ENST00000480327 KLHL42Q9P2K6 505 aa8.78□□□□□ -1
VCP-206ENST00000480327 CTNNAL1Q9UBT7 734 aa8.78□□□□□ -1
VCP-206ENST00000480327 TBK1Q9UHD2 729 aa8.78□□□□□ -1
VCP-206ENST00000480327 SLC24A2Q9UI40 661 aa8.78□□□□□ -1
VCP-206ENST00000480327 ADAMTS6Q9UKP5 1117 aa8.78□□□□□ -1
VCP-206ENST00000480327 TLDC2A0PJX2 215 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 CLEC18AA5D8T8 446 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 OR6C74A6NCV1 312 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 NPEPPSL1A6NEC2 478 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 LILRA5A6NI73 299 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 ARHGEF33A8MVX0 844 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 FOXO6A8MYZ6 492 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 TRIM49D1C9J1S8 452 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 STMND1H3BQB6 276 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 DUX1O43812 170 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 UBXN7O94888 489 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 MATN4O95460 622 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 TSPAN12O95859 305 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 SYF2O95926 243 aaKnown RBP8.77□□□□□ -1.01
VCP-206ENST00000480327 TUBBP07437 444 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 CCDC166P0CW27 439 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 TPBGLP0DKB5 382 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 MPC1LP0DKB6 136 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 ENO3P13929 434 aaPredicted RBP8.77□□□□□ -1.01
VCP-206ENST00000480327 ZNF37AP17032 561 aaPredicted RBP8.77□□□□□ -1.01
VCP-206ENST00000480327 CD9P21926 228 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 NDUFS1P28331 727 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 TYK2P29597 1187 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 ATP5DP30049 168 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 GPR3P46089 330 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 SERPINB9P50453 376 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 RAB10P61026 200 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 IRF9Q00978 393 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 CLPPQ16740 277 aaPredicted RBP8.77□□□□□ -1.01
VCP-206ENST00000480327 SNAP47Q5SQN1 464 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 CLEC18BQ6UXF7 455 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 UNC5DQ6UXZ4 953 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 UBE2R2Q712K3 238 aaPredicted RBP8.77□□□□□ -1.01
VCP-206ENST00000480327 TAOK1Q7L7X3 1001 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 TIPARPQ7Z3E1 657 aaKnown RBP8.77□□□□□ -1.01
VCP-206ENST00000480327 TAX1BP1Q86VP1 789 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 DCUN1D3Q8IWE4 304 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 RBM12BQ8IXT5 1001 aaKnown RBP8.77□□□□□ -1.01
VCP-206ENST00000480327 TBC1D21Q8IYX1 336 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 CLEC18CQ8NCF0 446 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 OR4D9Q8NGE8 314 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 EPS8L3Q8TE67 593 aaKnown RBP8.77□□□□□ -1.01
VCP-206ENST00000480327 LCN9Q8WX39 176 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 RSC1A1Q92681 617 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 DHRS4Q9BTZ2 278 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 EPN3Q9H201 632 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 VPS11Q9H270 941 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 SRMSQ9H3Y6 488 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 SYTL2Q9HCH5 934 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 SNX15Q9NRS6 342 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 OGFRQ9NZT2 677 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 PDP2Q9P2J9 529 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 KLHL3Q9UH77 587 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 IKZF3Q9UKT9 509 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 ICKQ9UPZ9 632 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
VCP-206ENST00000480327 PRRC2CQ9Y520 2896 aaKnown RBP8.76□□□□□ -1.01
VCP-206ENST00000480327 ANKRD12Q6UB98 2062 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 A8MU76 341 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 CDC7O00311 574 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 BTN3A1O00481 513 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 NKX2-8O15522 239 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 ZW10O43264 779 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 PSIP1O75475 530 aaKnown RBP8.76□□□□□ -1.01
VCP-206ENST00000480327 ERLIN1O75477 346 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 KRT38O76015 456 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 CATP04040 527 aaKnown RBP8.76□□□□□ -1.01
VCP-206ENST00000480327 ALDOAP04075 364 aaKnown RBP8.76□□□□□ -1.01
VCP-206ENST00000480327 RPN2P04844 631 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 POLR2CP19387 275 aaPredicted RBP8.76□□□□□ -1.01
VCP-206ENST00000480327 MAP4P27816 1152 aaKnown RBP8.76□□□□□ -1.01
VCP-206ENST00000480327 CRABP2P29373 138 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 SERPINB8P50452 374 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 EPHA4P54764 986 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 GFERP55789 205 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 POLE2P56282 527 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 PPP1CAP62136 330 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 IFFO1Q0D2I5 559 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 ILF2Q12905 390 aaKnown RBP8.76□□□□□ -1.01
VCP-206ENST00000480327 KCNAB2Q13303 367 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 TRA2AQ13595 282 aaKnown RBP eCLIP8.76□□□□□ -1.01
VCP-206ENST00000480327 TSTA3Q13630 321 aaPredicted RBP8.76□□□□□ -1.01
VCP-206ENST00000480327 CSHL1Q14406 222 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 GRB7Q14451 532 aa8.76□□□□□ -1.01
VCP-206ENST00000480327 ZKSCAN8Q15776 578 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms