RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC1A1P43005 524 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 ATG9BQ674R7 924 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 ITPRIPL1Q6GPH6 555 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 NDUFAF7Q7L592 441 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 NLRP9Q7RTR0 991 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 TMTC1Q8IUR5 882 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 PRSS58Q8IYP2 241 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 SIRT6Q8N6T7 355 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 STT3BQ8TCJ2 826 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 BRIX1Q8TDN6 353 aaKnown RBP16.42■□□□□ 0.22
VIM-204ENST00000478746 MIEF2Q96C03 454 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 MTFMTQ96DP5 389 aaKnown RBP16.42■□□□□ 0.22
VIM-204ENST00000478746 QKIQ96PU8 341 aaKnown RBP eCLIP16.42■□□□□ 0.22
VIM-204ENST00000478746 GORASP1Q9BQQ3 440 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 LUC7LQ9NQ29 371 aaKnown RBP16.42■□□□□ 0.22
VIM-204ENST00000478746 INTS7Q9NVH2 962 aaKnown RBP16.42■□□□□ 0.22
VIM-204ENST00000478746 C3orf18Q9UK00 162 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 HYOU1Q9Y4L1 999 aa16.42■□□□□ 0.22
VIM-204ENST00000478746 BHMG1C9JSJ3 638 aaPredicted RBP16.41■□□□□ 0.22
VIM-204ENST00000478746 C19orf84I3L1E1 186 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 WFS1O76024 890 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 FTH1P02794 183 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 ZGLP1P0C6A0 271 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 FDXRP22570 491 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 RAB28P51157 221 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 UBASH3AP57075 661 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 ADORA2A-AS1P86434 159 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 PRPSAP1Q14558 356 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 FIGLAQ6QHK4 219 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 NAPRTQ6XQN6 538 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 MICALCLQ6ZW33 695 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 CDH24Q86UP0 819 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 RHOT2Q8IXI1 618 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 C2orf73Q8N5S3 287 aaPredicted RBP16.41■□□□□ 0.22
VIM-204ENST00000478746 SUN3Q8TAQ9 357 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 SLC22A18Q96BI1 424 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 DNAJC1Q96KC8 554 aaKnown RBP16.41■□□□□ 0.22
VIM-204ENST00000478746 SELENOSQ9BQE4 189 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 C10orf88Q9H8K7 445 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 ZNF304Q9HCX3 659 aa16.41■□□□□ 0.22
VIM-204ENST00000478746 ZNF282Q9UDV7 671 aaPredicted RBP16.41■□□□□ 0.22
VIM-204ENST00000478746 SLC5A10A0PJK1 596 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 FITM1A5D6W6 292 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 H7C0C1 242 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 QSOX1O00391 747 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 SPOPO43791 374 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 SLC19A2O60779 497 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 DIAPH2O60879 1101 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 BMP10O95393 424 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 WDPCPO95876 746 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 GYPCP04921 128 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 SERPINA7P05543 415 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 COMTP21964 271 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 RBL1P28749 1068 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 KIR3DL1P43629 444 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 ATP5OP48047 213 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 PLOD1Q02809 727 aaPredicted RBP16.4■□□□□ 0.22
VIM-204ENST00000478746 IQCB1Q15051 598 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 DBN1Q16643 649 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 SYTL3Q4VX76 610 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 TFDP3Q5H9I0 405 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 WASHC2DQ5SRD0 308 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 PIANPQ8IYJ0 282 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 DTWD1Q8N5C7 304 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 C14orf79Q96F83 325 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 POM121Q96HA1 1249 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 ZNF285Q96NJ3 590 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 ENAMQ9NRM1 1142 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 PRSS21Q9Y6M0 314 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 NAV3Q8IVL0 2385 aa16.4■□□□□ 0.22
VIM-204ENST00000478746 HYKKA2RU49 373 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 H7C0S8 307 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 SRPX2O60687 465 aaPredicted RBP16.39■□□□□ 0.21
VIM-204ENST00000478746 CLDN14O95500 239 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 COX6A1P12074 109 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 CXCR2P25025 360 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 PSMB4P28070 264 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 PKLRP30613 574 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 VSX2P58304 361 aaPredicted RBP16.39■□□□□ 0.21
VIM-204ENST00000478746 CACNG1Q06432 222 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 SF1Q15637 639 aaKnown RBP16.39■□□□□ 0.21
VIM-204ENST00000478746 C3AR1Q16581 482 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 ASTE1Q2TB18 679 aaPredicted RBP16.39■□□□□ 0.21
VIM-204ENST00000478746 FAAH2Q6GMR7 532 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 DENND5AQ6IQ26 1287 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 CNSTQ6PJW8 725 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 LAPTM4BQ86VI4 370 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 CEP97Q8IW35 865 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 LMNTD1Q8N9Z9 388 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 LINC01555Q8NAE3 123 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 ADAMTS18Q8TE60 1221 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 CHTF18Q8WVB6 975 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 TBL1YQ9BQ87 522 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 FERMT1Q9BQL6 677 aa16.39■□□□□ 0.21
VIM-204ENST00000478746 NLE1Q9NVX2 485 aaPredicted RBP16.39■□□□□ 0.21
VIM-204ENST00000478746 FEZ2Q9UHY8 353 aaPredicted RBP16.39■□□□□ 0.21
VIM-204ENST00000478746 NCOA6Q14686 2063 aaPredicted RBP16.38■□□□□ 0.21
VIM-204ENST00000478746 AKR1B10O60218 316 aa16.38■□□□□ 0.21
VIM-204ENST00000478746 PRAMEF2O60811 474 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms