RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 EI24O14681 340 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PDPK1O15530 556 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SLC25A12O75746 678 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PGRP06401 933 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 CCR8P51685 355 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 DNAJB13P59910 316 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 NR1D2Q14995 579 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SPANXN4Q5MJ08 99 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 DCST1Q5T197 706 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 CEP68Q76N32 757 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 CACTIN-AS1Q8N1I8 211 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SMPDL3AQ92484 453 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SLC38A3Q99624 504 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 RAB11FIP5Q9BXF6 653 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SLC29A3Q9BZD2 475 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 MCM8Q9UJA3 840 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 TMEM98Q9Y2Y6 226 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 TP73O15350 636 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SAGP10523 405 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-208ENST00000478423 ADARP55265 1226 aaKnown RBP13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SLC9A5Q14940 896 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 ZNF57Q68EA5 555 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-208ENST00000478423 TRAF7Q6Q0C0 670 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 MBOAT1Q6ZNC8 495 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PNPLA1Q8N8W4 532 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 DNAJB8Q8NHS0 232 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SORCS1Q8WY21 1168 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 BADQ92934 168 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 NSUN5Q96P11 429 aaKnown RBP13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 POPDC3Q9HBV1 291 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 MANBAO00462 879 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 EBLN1P0CF75 366 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 HOXB2P14652 356 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 HSD17B2P37059 387 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 ETV3P41162 512 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 TM4SF4P48230 202 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 BLKP51451 505 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
NPHP4-208ENST00000478423 BLMHQ13867 455 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 IFI44LQ53G44 452 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 RABL3Q5HYI8 236 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 ZNF776Q68DI1 518 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-208ENST00000478423 NUDT13Q86X67 352 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 SLC38A4Q969I6 547 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PLEKHG4BQ96PX9 1271 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 C1orf21Q9H246 121 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 STMN3Q9NZ72 180 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 NENFQ9UMX5 172 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 ZCWPW2A0A1B0GU75 182 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 ARPC2O15144 300 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PAK4O96013 591 aaPredicted RBP13.88□□□□□ -0.19
NPHP4-208ENST00000478423 CPN2P22792 545 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PPP1R3AQ16821 1122 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PDE12Q6L8Q7 609 aaKnown RBP13.88□□□□□ -0.19
NPHP4-208ENST00000478423 KBTBD8Q8NFY9 601 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 TMEM74Q96NL1 305 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 TUBGCP5Q96RT8 1024 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 ADAP2Q9NPF8 381 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 PRDM8Q9NQV8 689 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 EVA1BQ9NVM1 165 aa13.88□□□□□ -0.19
NPHP4-208ENST00000478423 TGM5O43548 720 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 TPP2P29144 1249 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 HMGCLP35914 325 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 CLK3P49761 638 aaKnown RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 EMC10Q5UCC4 262 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 TMIGD1Q6UXZ0 262 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 SLITRK2Q9H156 845 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 CTPS2Q9NRF8 586 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 MKS1Q9NXB0 559 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 EHD3Q9NZN3 535 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 MYH7BA7E2Y1 1941 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 DPPA5A6NC42 116 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 CENPXA8MT69 81 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 KLK1P06870 262 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 ZNF805Q5CZA5 627 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 SUSD1Q6UWL2 747 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 APCDD1Q8J025 514 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 GIPC3Q8TF64 312 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 GTPBP3Q969Y2 492 aaKnown RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 MCCC1Q96RQ3 725 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 OLFM1Q99784 485 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 CD244Q9BZW8 370 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 OR51B5Q9H339 312 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 IL23AQ9NPF7 189 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 ZC4H2Q9NQZ6 224 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 MTMR10Q9NXD2 777 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 DNAJB9Q9UBS3 223 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 NKX1-2Q9UD57 310 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 MRPS7Q9Y2R9 242 aaKnown RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 LIN7AO14910 233 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 FADS2O95864 444 aaKnown RBP13.87□□□□□ -0.19
NPHP4-208ENST00000478423 CD1DP15813 335 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 SNAPC1Q16533 368 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 C6orf136Q5SQH8 315 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 AHSA2Q719I0 299 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 HEATR4Q86WZ0 1026 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 PRSS58Q8IYP2 241 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 RASSF5Q8WWW0 418 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms