RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CXXC5Q7LFL8 322 aaKnown RBP13.55□□□□□ -0.24
ATG9A-220ENST00000475339 OR13C4Q8NGS5 318 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 OR2Y1Q8NGV0 311 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 GRK7Q8WTQ7 553 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 CAPZA3Q96KX2 299 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 SMR3AQ99954 134 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 TRIM56Q9BRZ2 755 aaKnown RBP13.55□□□□□ -0.24
ATG9A-220ENST00000475339 EPS8L2Q9H6S3 715 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 EIF2B3Q9NR50 452 aaKnown RBP13.55□□□□□ -0.24
ATG9A-220ENST00000475339 CCM2LQ9NUG4 571 aaPredicted RBP13.55□□□□□ -0.24
ATG9A-220ENST00000475339 SEC14L3Q9UDX4 400 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
ATG9A-220ENST00000475339 CHUKO15111 745 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 ZNF749O43361 778 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 UGT1A9O60656 530 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 PHF2O75151 1096 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 SRP72O76094 671 aaKnown RBP13.54□□□□□ -0.24
ATG9A-220ENST00000475339 CDK14O94921 469 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 KRT14P02533 472 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 UGT1A6P19224 532 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 MSH3P20585 1137 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 ITGALP20701 1170 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 IDSP22304 550 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 UGT1A1P22309 533 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 UGT1A4P22310 534 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 COILP38432 576 aaPredicted RBP13.54□□□□□ -0.24
ATG9A-220ENST00000475339 FNTAP49354 379 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 TERF1P54274 439 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 CASP6P55212 293 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 GPS1Q13098 491 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 TRIP13Q15645 432 aaPredicted RBP13.54□□□□□ -0.24
ATG9A-220ENST00000475339 C3AR1Q16581 482 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 IRAK1BP1Q5VVH5 260 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 TTC27Q6P3X3 843 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 ADGRG6Q86SQ4 1221 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 LRRTM4Q86VH4 590 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 TRAPPC5Q8IUR0 188 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 PTERQ96BW5 349 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 ULK4Q96C45 1275 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 DNAJC1Q96KC8 554 aaKnown RBP13.54□□□□□ -0.24
ATG9A-220ENST00000475339 TREX2Q9BQ50 279 aaPredicted RBP13.54□□□□□ -0.24
ATG9A-220ENST00000475339 ASB8Q9H765 288 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 UGT1A7Q9HAW7 530 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 UGT1A10Q9HAW8 530 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 UGT1A8Q9HAW9 530 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 SLC6A20Q9NP91 592 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 SMOXQ9NWM0 555 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 TINAGQ9UJW2 476 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 FBXL4Q9UKA2 621 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 SAR1BQ9Y6B6 198 aa13.54□□□□□ -0.24
ATG9A-220ENST00000475339 ATRQ13535 2644 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 ANKRD12Q6UB98 2062 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 SLC9B1P1A6NJY1 282 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 AP3B1O00203 1094 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 GPR39O43194 453 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 SLC19A2O60779 497 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 CNOT3O75175 753 aaKnown RBP13.53□□□□□ -0.24
ATG9A-220ENST00000475339 C8BP07358 591 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 UMODP07911 640 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 CBSLP0DN79 551 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 VCLP18206 1134 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 MC4RP32245 332 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 CBSP35520 551 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 PAFAH1B1P43034 410 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
ATG9A-220ENST00000475339 SARNPP82979 210 aaKnown RBP13.53□□□□□ -0.24
ATG9A-220ENST00000475339 CYP1B1Q16678 543 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 CCDC38Q502W7 563 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 GPRC6AQ5T6X5 926 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 TMEM198Q66K66 360 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 TMEM200AQ86VY9 491 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 ZNF547Q8IVP9 402 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 C17orf53Q8N3J3 647 aaPredicted RBP13.53□□□□□ -0.24
ATG9A-220ENST00000475339 DDHD1Q8NEL9 900 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 PPHLN1Q8NEY8 458 aaKnown RBP13.53□□□□□ -0.24
ATG9A-220ENST00000475339 STYXQ8WUJ0 223 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 DCUN1D1Q96GG9 259 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 C19orf43Q9BQ61 176 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 TIMM29Q9BSF4 260 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 NDC1Q9BTX1 674 aa13.53□□□□□ -0.24
ATG9A-220ENST00000475339 GPN3Q9UHW5 284 aaPredicted RBP13.53□□□□□ -0.24
ATG9A-220ENST00000475339 PCM1Q15154 2024 aa13.52□□□□□ -0.24
ATG9A-220ENST00000475339 CFAP99D6REC4 459 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 CCL22O00626 93 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 KMOO15229 486 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 WISP2O76076 250 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 KLHL18O94889 574 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 RALBP11234 206 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 GRIA1P42261 906 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 PREPP48147 710 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 SESN2P58004 480 aaPredicted RBP13.52□□□□□ -0.25
ATG9A-220ENST00000475339 TMEM115Q12893 351 aaPredicted RBP13.52□□□□□ -0.25
ATG9A-220ENST00000475339 MSLNQ13421 630 aaPredicted RBP13.52□□□□□ -0.25
ATG9A-220ENST00000475339 SLC9A5Q14940 896 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 PPP1R7Q15435 360 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 C1orf189Q5VU69 101 aa13.52□□□□□ -0.25
ATG9A-220ENST00000475339 NCCRP1Q6ZVX7 275 aaPredicted RBP13.52□□□□□ -0.25
ATG9A-220ENST00000475339 SNX20Q7Z614 316 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms