RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PDZK1P1A8MUH7 402 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ANKRD66B4E2M5 251 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HAT1O14929 419 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZNF682O95780 498 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HMBSP08397 361 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 TRAPPC2P0DI81 140 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 TRAPPC2BP0DI82 140 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZNF24P17028 368 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CTPS1P17812 591 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 MLLT10P55197 1068 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 VBP1P61758 197 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZNF177Q13360 481 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 RFTN2Q52LD8 501 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 SETMARQ53H47 684 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 CTSL3PQ5NE16 218 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 TPRG1LQ5T0D9 272 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ARTNQ5T4W7 220 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CES5AQ6NT32 575 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZNF367Q7RTV3 350 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 LRRTM3Q86VH5 581 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 LYSMD2Q8IV50 215 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CCDC103Q8IW40 242 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZZZ3Q8IYH5 903 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CNIH3Q8TBE1 160 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 IGSF8Q969P0 613 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 COPS4Q9BT78 406 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 GABARAPL3Q9BY60 117 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 GPR63Q9BZJ6 419 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 NXF2Q9GZY0 626 aaKnown RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 P2RY12Q9H244 342 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ELOVL6Q9H5J4 265 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 DYRK4Q9NR20 520 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ABCB10Q9NRK6 738 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 MIOSQ9NXC5 875 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 PDP1Q9P0J1 537 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 FKBPLQ9UIM3 349 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 MED16Q9Y2X0 877 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 KLK4Q9Y5K2 254 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 RAI2Q9Y5P3 530 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 DOCK4Q8N1I0 1966 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ACSL4O60488 711 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 STK16O75716 305 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 OXSR1O95747 527 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 IFNA14P01570 189 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CNPP09543 421 aaKnown RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 ETV6P41212 452 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 KIR3DL1P43629 444 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 PXNP49023 591 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 HNMTP50135 292 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HTR6P50406 440 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CLCN7P51798 805 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HK3P52790 923 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 DUOXA1Q1HG43 343 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 VMACQ2NL98 169 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 EML3Q32P44 896 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 USP39Q53GS9 565 aaKnown RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 ANXA8L1Q5VT79 327 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZNF605Q86T29 641 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 PLPP6Q8IY26 295 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CPA6Q8N4T0 437 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZBTB2Q8N680 514 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 BEND7Q8N7W2 519 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 DENND6BQ8NEG7 585 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 OVCA2Q8WZ82 227 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 TP53INP1Q96A56 240 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 PLD4Q96BZ4 506 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 FAM193BQ96PV7 902 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 SNX18Q96RF0 628 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZNF556Q9HAH1 456 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 KCTD5Q9NXV2 234 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 KIAA1522Q9P206 1035 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 DNMT3LQ9UJW3 386 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZNF221Q9UK13 617 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 IKZF3Q9UKT9 509 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 USP22Q9UPT9 525 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 POFUT2Q9Y2G5 429 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 POLR2AP24928 1970 aaKnown RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 EFCAB10A6NFE3 127 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 FAM25AB3EWG3 89 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 FAM25CB3EWG5 89 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 FAM25GB3EWG6 89 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 XPNPEP2O43895 674 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 POMCP01189 267 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HIST1H2AGP0C0S8 130 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 CR2P20023 1033 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 HIST1H2ADP20671 130 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 FMO3P31513 532 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 AP1S1P61966 158 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 NPRL3Q12980 569 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 DGCR6Q14129 220 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 SIM2Q14190 667 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 TIGD6Q17RP2 521 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 PGS1Q32NB8 556 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 FAHD1Q6P587 224 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 SBSNQ6UWP8 590 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 GDPGP1Q6ZNW5 385 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 CBLL1Q75N03 491 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZSWIM9Q86XI8 627 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 EFHBQ8N7U6 833 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms