RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TESK1Q15569 626 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 ZNF630Q2M218 657 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-209ENST00000473421 VWA2Q5GFL6 755 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 ATG9BQ674R7 924 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 FRMPD2BQ6IN97 320 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 RPUSD3Q6P087 351 aaKnown RBP12.06□□□□□ -0.48
TRAF4-209ENST00000473421 GFRALQ6UXV0 394 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 RHOT2Q8IXI1 618 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 OR4N4Q8N0Y3 316 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 SIRT6Q8N6T7 355 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 OR8K1Q8NGG5 319 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 ACTL9Q8TC94 416 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 BRIX1Q8TDN6 353 aaKnown RBP12.06□□□□□ -0.48
TRAF4-209ENST00000473421 NACC2Q96BF6 587 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 ZNF285Q96NJ3 590 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 LMF1Q96S06 567 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 EPS8L2Q9H6S3 715 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 NHEJ1Q9H9Q4 299 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-209ENST00000473421 ARNT2Q9HBZ2 717 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 NLE1Q9NVX2 485 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-209ENST00000473421 KLF2Q9Y5W3 355 aaPredicted RBP12.06□□□□□ -0.48
TRAF4-209ENST00000473421 IQCF5A8MTL0 148 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 H7C0S8 307 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 LIN7AO14910 233 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-209ENST00000473421 PRICKLE3O43900 615 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-209ENST00000473421 ZRANB2O95218 330 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAF4-209ENST00000473421 AP2A1O95782 977 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 PRR35P0CG20 571 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 CCR7P32248 378 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 KIR3DL1P43629 444 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 POU6F1Q14863 301 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 KIR2DS3Q14952 304 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 TCEAL1Q15170 157 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 CCSMST1Q4G0I0 132 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 CCDC38Q502W7 563 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 KCTD11Q693B1 232 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 FIGLAQ6QHK4 219 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 BNC2Q6ZN30 1099 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-209ENST00000473421 GDF7Q7Z4P5 450 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 KLHDC8BQ8IXV7 354 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 KATNAL2Q8IYT4 538 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 RCOR2Q8IZ40 523 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-209ENST00000473421 STT3BQ8TCJ2 826 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 HEXDCQ8WVB3 486 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 CRB3Q9BUF7 120 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 IGSF5Q9NSI5 407 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 POLG2Q9UHN1 485 aa12.05□□□□□ -0.48
TRAF4-209ENST00000473421 NCOA6Q14686 2063 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-209ENST00000473421 SYCE3A1L190 88 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 HEATR9A2RTY3 570 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 CCDC162PA2VCL2 907 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 FITM1A5D6W6 292 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 APOC4-APOC2K7ER74 178 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 KCNN4O15554 427 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 PSTPIP1O43586 416 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 AP2A2O94973 939 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 METTL18O95568 372 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 WDPCPO95876 746 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 HPP00738 406 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 APOC2P02655 101 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 ZGLP1P0C6A0 271 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 COX6A1P12074 109 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 CD9P21926 228 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 FOXN2P32314 431 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 ARSFP54793 590 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 VSX2P58304 361 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-209ENST00000473421 ARG2P78540 354 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 CACNG1Q06432 222 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 SEMA3AQ14563 771 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 WASHC2DQ5SRD0 308 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 IRAK1BP1Q5VVH5 260 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 FAAH2Q6GMR7 532 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 CFAP61Q8NHU2 1237 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 DLG3Q92796 817 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 VPS37BQ9H9H4 285 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 MRM3Q9HC36 420 aaKnown RBP12.04□□□□□ -0.48
TRAF4-209ENST00000473421 SEMA3GQ9NS98 782 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 ABHD10Q9NUJ1 306 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 SLC2A6Q9UGQ3 507 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 C3orf18Q9UK00 162 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 AAR2Q9Y312 384 aaKnown RBP12.04□□□□□ -0.48
TRAF4-209ENST00000473421 CPAMD8Q8IZJ3 1885 aa12.04□□□□□ -0.48
TRAF4-209ENST00000473421 MROH6A6NGR9 719 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 RBP3P10745 1247 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 ITGAMP11215 1152 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 ACPPP15309 386 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 CA7P43166 264 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 RAB28P51157 221 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 EIF3EP60228 445 aaKnown RBP12.03□□□□□ -0.48
TRAF4-209ENST00000473421 EEF1A2Q05639 463 aaKnown RBP12.03□□□□□ -0.48
TRAF4-209ENST00000473421 GRM7Q14831 915 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 C3AR1Q16581 482 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 ITPRIPL1Q6GPH6 555 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 ZNF449Q6P9G9 518 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 TMEM207Q6UWW9 146 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 ADAMTS18Q8TE60 1221 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 COG1Q8WTW3 980 aa12.03□□□□□ -0.48
TRAF4-209ENST00000473421 HAS2Q92819 552 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms