RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NFE2L1Q14494 772 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 PTPRCAPQ14761 206 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 RASA2Q15283 850 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 GPR19Q15760 415 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 HSP90AA5PQ58FG0 334 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 AARS2Q5JTZ9 985 aaKnown RBP8.79□□□□□ -1
SF3A1-206ENST00000471037 TMTC4Q5T4D3 741 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 GPRC6AQ5T6X5 926 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 TEDDM1Q5T9Z0 273 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 MRNIPQ6NTE8 343 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 NEPROQ6NW34 567 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 JMJD6Q6NYC1 403 aaPredicted RBP8.79□□□□□ -1
SF3A1-206ENST00000471037 TMEM220Q6QAJ8 160 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 KIAA0408Q6ZU52 694 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 GALNT7Q86SF2 657 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 SLC26A11Q86WA9 606 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 TDRPQ86YL5 185 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 CTAGE3PQ8IX95 158 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 DSELQ8IZU8 1212 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 RIBC1Q8N443 379 aaPredicted RBP8.79□□□□□ -1
SF3A1-206ENST00000471037 TMEM102Q8N9M5 508 aaPredicted RBP8.79□□□□□ -1
SF3A1-206ENST00000471037 Q8NA96 180 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 OR4L1Q8NH43 312 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 UHMK1Q8TAS1 419 aaKnown RBP8.79□□□□□ -1
SF3A1-206ENST00000471037 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.79□□□□□ -1
SF3A1-206ENST00000471037 PNPLA2Q96AD5 504 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 ZIM3Q96PE6 472 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 NLNQ9BYT8 704 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 SLC29A3Q9BZD2 475 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 CHST8Q9H2A9 424 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 KIR3DX1Q9H7L2 352 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 CATSPERZQ9NTU4 200 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 IMP3Q9NV31 184 aaKnown RBP8.79□□□□□ -1
SF3A1-206ENST00000471037 ZNF446Q9NWS9 450 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 SLC24A2Q9UI40 661 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 FKBPLQ9UIM3 349 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 TCFL5Q9UL49 500 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 SNX7Q9UNH6 387 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 NFS1Q9Y697 457 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 IKBKGQ9Y6K9 419 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 PIKFYVEQ9Y2I7 2098 aa8.79□□□□□ -1
SF3A1-206ENST00000471037 TNRC6AQ8NDV7 1962 aaKnown RBP8.79□□□□□ -1
SF3A1-206ENST00000471037 GLYATL1P3A0A0U1RQE8 302 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 WIPF3A6NGB9 483 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 OR2AG2A6NM03 316 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 TCP11X1B4DZS4 312 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 MEN1O00255 615 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 CCL22O00626 93 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 GAPDHSO14556 408 aaPredicted RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 RASGRF2O14827 1237 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 PFDN6O15212 129 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 CD3EAPO15446 510 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 GPR39O43194 453 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 UGT1A9O60656 530 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 CDH16O75309 829 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 SRP72O76094 671 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 PRAMEF1O95521 474 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 CAPN1P07384 714 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 INHBAP08476 426 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 UGT1A6P19224 532 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 ITGALP20701 1170 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 OGNP20774 298 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 UGT1A1P22309 533 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 UGT1A4P22310 534 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 MC4RP32245 332 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 FOXN2P32314 431 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 CA5AP35218 305 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 PPARGP37231 505 aaPredicted RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 GP5P40197 560 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 MSH2P43246 934 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 SERPINB9P50453 376 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 KPNA2P52292 529 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 XIAPP98170 497 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 ZNF844Q08AG5 666 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 ABRQ12979 859 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 GPR33Q49SQ1 333 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 FASTKD1Q53R41 847 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 PRR30Q53SZ7 412 aaPredicted RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 PLEKHS1Q5SXH7 462 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 RNF187Q5TA31 235 aaPredicted RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 SLC6A19Q695T7 634 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 ZNF470Q6ECI4 717 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 FAM198BQ6UWH4 519 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 FAM151BQ6UXP7 276 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 MED25Q71SY5 747 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 TAOK1Q7L7X3 1001 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 SNX20Q7Z614 316 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 CILP2Q8IUL8 1156 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 OTUD6BQ8N6M0 293 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 BEND7Q8N7W2 519 aaPredicted RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 PPM1NQ8N819 430 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 ENDOVQ8N8Q3 282 aaKnown RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 FDCSPQ8NFU4 85 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 OR2W6PQ8NHA6 318 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 SLC44A1Q8WWI5 657 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 LINC00615Q96LM1 132 aaPredicted RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 INSM2Q96T92 566 aaPredicted RBP8.78□□□□□ -1
SF3A1-206ENST00000471037 TCF12Q99081 682 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 PAFAH2Q99487 392 aa8.78□□□□□ -1
SF3A1-206ENST00000471037 TTC1Q99614 292 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms