RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 DPP6P42658 865 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 TPMTP51580 245 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 UFM1P61960 85 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 TBPL1P62380 186 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 RPL38P63173 70 aaKnown RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 DMPKQ09013 629 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 XKR6Q5GH73 641 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 PIGGQ5H8A4 983 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 IL23RQ5VWK5 629 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 FRG2Q64ET8 278 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 STMN2Q93045 179 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 FRG2BQ96QU4 278 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 UHRF1Q96T88 793 aaPredicted RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 APOOQ9BUR5 198 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 ACPTQ9BZG2 426 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 SLC52A3Q9NQ40 469 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 POLR3HQ9Y535 204 aaPredicted RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 PCM1Q15154 2024 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 C9JVG2 144 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 ANGPT2O15123 496 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 CFLARO15519 480 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 SORBS2O94875 1100 aaKnown RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 FUCA1P04066 466 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 CEACAM5P06731 702 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 SLC2A4P14672 509 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 VPS26BQ4G0F5 336 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 COQ5Q5HYK3 327 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 CAPN13Q6MZZ7 669 aaPredicted RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 CYP20A1Q6UW02 462 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 RETREG3Q86VR2 466 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 DCUN1D3Q8IWE4 304 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 EFCAB3Q8N7B9 438 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 ENDOVQ8N8Q3 282 aaKnown RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 TFGQ92734 400 aaPredicted RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 RAD51AP1Q96B01 352 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 ROPN1LQ96C74 230 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 MTFMTQ96DP5 389 aaKnown RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 SPDL1Q96EA4 605 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 LRTM1Q9HBL6 345 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 GPRC5BQ9NZH0 403 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 NDRG2Q9UN36 371 aaKnown RBP20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 PSMD13Q9UNM6 376 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 POMPQ9Y244 141 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 PCDHGA7Q9Y5G6 932 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 KCNE2Q9Y6J6 123 aa20.5■□□□□ 0.87
PPP1R3F-203ENST00000466508 CACNB4O00305 520 aaPredicted RBP20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 G6PDP11413 515 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 GNAZP19086 355 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 CD22P20273 847 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 ACSL1P33121 698 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 ZFP36L2P47974 494 aaKnown RBP20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 KCNK10P57789 538 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 PSME3P61289 254 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 PUS10Q3MIT2 529 aaKnown RBP20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 CHST15Q7LFX5 561 aaPredicted RBP20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 TRIM69Q86WT6 500 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 ZFAND4Q86XD8 727 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 DENND6BQ8NEG7 585 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 PROKR1Q8TCW9 393 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 SLC45A3Q96JT2 553 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 MYOCQ99972 504 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 TIMM29Q9BSF4 260 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 SGPP1Q9BX95 441 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 C1orf109Q9NX04 203 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 ACSL5Q9ULC5 683 aa20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 EIF3LQ9Y262 564 aaKnown RBP20.49■□□□□ 0.87
PPP1R3F-203ENST00000466508 A0A1W2PP18 115 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 SERTM1A2A2V5 107 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 IFRD1O00458 451 aaPredicted RBP20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 MAN2B1O00754 1011 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 CLGNO14967 610 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 RPN2P04844 631 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 SLC35G4P0C7Q5 338 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 ACP5P13686 325 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 HNF4AP41235 474 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 NEK2P51955 445 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 THOP1P52888 689 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 ZNF33BQ06732 778 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 DOC2AQ14183 400 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 GRHL2Q6ISB3 625 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 PTCRAQ6ISU1 281 aaPredicted RBP20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 C8orf82Q6P1X6 216 aaPredicted RBP20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 OR5AR1Q8NGP9 310 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 OR2T34Q8NGX1 318 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 BTBD1Q9H0C5 482 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 ACTL8Q9H568 366 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 ASIC5Q9NY37 505 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 NKX1-2Q9UD57 310 aaPredicted RBP20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 NCOR1O75376 2440 aa20.48■□□□□ 0.87
PPP1R3F-203ENST00000466508 FAM234BA2RU67 622 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 E7ENX8 843 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 ANKRD28O15084 1053 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 SEC22BO75396 215 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 RSL1D1O76021 490 aaKnown RBP20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 KELP23276 732 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 PRPH2P23942 346 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 POLR2JP52435 117 aaKnown RBP20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 PNLIPRP1P54315 467 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 TAP2Q03519 686 aa20.47■□□□□ 0.87
PPP1R3F-203ENST00000466508 PRKG2Q13237 762 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms