RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ZNF542PQ5EBM4 170 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 TMEM198Q66K66 360 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 UGT2A3Q6UWM9 527 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 FRA10AC1Q70Z53 315 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 UBE2R2Q712K3 238 aaPredicted RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 ADAMTSL2Q86TH1 951 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 TICAM1Q8IUC6 712 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 SLC22A15Q8IZD6 547 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 MAML2Q8IZL2 1156 aaPredicted RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 FBXO39Q8N4B4 442 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 CARS2Q9HA77 564 aaKnown RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 CFAP20Q9Y6A4 193 aaKnown RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 PRSS38A1L453 326 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 FFAR2O15552 330 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 JUNP05412 331 aaKnown RBP18.1■□□□□ 0.49
CAPN3-209ENST00000466222 PTK2BQ14289 1009 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 ZXDCQ2QGD7 858 aaPredicted RBP18.1■□□□□ 0.49
CAPN3-209ENST00000466222 ZNF678Q5SXM1 525 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 THEMIS2Q5TEJ8 643 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 ARMCX6Q7L4S7 300 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 ABI3BPQ7Z7G0 1075 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 TMEM105Q8N8V8 129 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 BHLHE22Q8NFJ8 381 aaPredicted RBP18.1■□□□□ 0.49
CAPN3-209ENST00000466222 CCL4L1Q8NHW4 92 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 GLMNQ92990 594 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 ASB9Q96DX5 294 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 HSPA12BQ96MM6 686 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 OARD1Q9Y530 152 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 HS3ST3A1Q9Y663 406 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 C17orf113A0A1B0GUU1 675 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 H0YJX3 145 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 GFYI3L273 518 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 TXNDC9O14530 226 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 ACOT8O14734 319 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 KMOO15229 486 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 CFLARO15519 480 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 TAPBPO15533 448 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 MATN4O95460 622 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 EEF1DP29692 281 aaKnown RBP18.1■□□□□ 0.49
CAPN3-209ENST00000466222 GDF5P43026 501 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 KIAA1024LP59773 190 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 MRPS22P82650 360 aaKnown RBP18.1■□□□□ 0.49
CAPN3-209ENST00000466222 USP39Q53GS9 565 aaKnown RBP18.1■□□□□ 0.49
CAPN3-209ENST00000466222 UNC50Q53HI1 259 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.1■□□□□ 0.49
CAPN3-209ENST00000466222 HACD2Q6Y1H2 254 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 GALNT13Q8IUC8 556 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 LMNTD1Q8N9Z9 388 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 HM13Q8TCT9 377 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 NRTNQ99748 197 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 MIR1-1HGQ9H1L0 117 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 OSGEPL1Q9H4B0 414 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 VCX3AQ9NNX9 186 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 TNFRSF12AQ9NP84 129 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 AASDHPPTQ9NRN7 309 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 WDR37Q9Y2I8 494 aa18.1■□□□□ 0.49
CAPN3-209ENST00000466222 WDR87Q6ZQQ6 2873 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 TECTAO75443 2155 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 C15orf38-AP3S2A0A0A6YYH1 394 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 SYCE1LA8MT33 242 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 ARHGEF33A8MVX0 844 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 KLK8O60259 260 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 SUPT7LO94864 414 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 MPC1LP0DKB6 136 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 IMPDH1P20839 514 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 BDKRB1P46663 353 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 RPIAP49247 311 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 NFKB2Q00653 900 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 TRAP1Q12931 704 aaKnown RBP18.09■□□□□ 0.49
CAPN3-209ENST00000466222 DYNC1I2Q13409 638 aaKnown RBP18.09■□□□□ 0.49
CAPN3-209ENST00000466222 ARPINQ7Z6K5 226 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 CUZD1Q86UP6 607 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 OXR1Q8N573 874 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 L3HYPDHQ96EM0 354 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 WDR92Q96MX6 357 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 SLC12A9Q9BXP2 914 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 OR52A5Q9H2C5 316 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 TCEAL2Q9H3H9 227 aaPredicted RBP18.09■□□□□ 0.49
CAPN3-209ENST00000466222 KLF15Q9UIH9 416 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 COMMD3-BMI1R4GMX3 469 aa18.09■□□□□ 0.49
CAPN3-209ENST00000466222 A0A1B0GTL3 188 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 UBFD1O14562 309 aaKnown RBP18.08■□□□□ 0.49
CAPN3-209ENST00000466222 UBDO15205 165 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 SNX2O60749 519 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 WNT1P04628 370 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 HOXC4P09017 264 aaPredicted RBP18.08■□□□□ 0.49
CAPN3-209ENST00000466222 THEGLP0DJG4 465 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 AK4P27144 223 aaPredicted RBP18.08■□□□□ 0.49
CAPN3-209ENST00000466222 PKNOX1P55347 436 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 POLE2P56282 527 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 PSME3P61289 254 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 HERVK_113P63132 956 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 ALG11Q2TAA5 492 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 CNPY1Q3B7I2 92 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 IRAK1BP1Q5VVH5 260 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 METRNLQ641Q3 311 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 MAMSTRQ6ZN01 415 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 SCARF2Q96GP6 870 aaPredicted RBP18.08■□□□□ 0.49
CAPN3-209ENST00000466222 EGFL8Q99944 293 aa18.08■□□□□ 0.49
CAPN3-209ENST00000466222 ERVK-6Q9BXR3 956 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms