RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GPN2Q9H9Y4 310 aaPredicted RBP15.58■□□□□ 0.08
CD28-203ENST00000458610 CIDEBQ9UHD4 219 aa15.58■□□□□ 0.08
CD28-203ENST00000458610 PLCL2Q9UPR0 1127 aa15.58■□□□□ 0.08
CD28-203ENST00000458610 PCDHB3Q9Y5E6 796 aa15.58■□□□□ 0.08
CD28-203ENST00000458610 AP1M2Q9Y6Q5 423 aa15.58■□□□□ 0.08
CD28-203ENST00000458610 TEX51A0A1B0GUA7 166 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 TCRBV9S1A1TA0A576 114 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 ESYT3A0FGR9 886 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 TMEM150CB9EJG8 249 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 K7ENP7 123 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 CPNE3O75131 537 aaKnown RBP15.57■□□□□ 0.08
CD28-203ENST00000458610 KRT37O76014 449 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 CCNDBP1O95273 360 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 CMPK1P30085 196 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 PHBP35232 272 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 RPA3P35244 121 aaPredicted RBP15.57■□□□□ 0.08
CD28-203ENST00000458610 PNLIPRP1P54315 467 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 CDKN2DP55273 166 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 ITGA1P56199 1179 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 CCSMST1Q4G0I0 132 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 PWWP2BQ6NUJ5 590 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 INO80CQ6PI98 192 aaPredicted RBP15.57■□□□□ 0.08
CD28-203ENST00000458610 PIWIL4Q7Z3Z4 852 aaKnown RBP15.57■□□□□ 0.08
CD28-203ENST00000458610 TRIM73Q86UV7 250 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 TAX1BP1Q86VP1 789 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 NKAPQ8N5F7 415 aaKnown RBP15.57■□□□□ 0.08
CD28-203ENST00000458610 FLVCR1-AS1Q8TAF5 88 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 DENND1AQ8TEH3 1009 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 IFT81Q8WYA0 676 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 ANKRD7Q92527 254 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 LINGO1Q96FE5 620 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 PDLIM5Q96HC4 596 aaKnown RBP15.57■□□□□ 0.08
CD28-203ENST00000458610 CCDC138Q96M89 665 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 SLC12A9Q9BXP2 914 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 FAM117AQ9C073 453 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 KLHL25Q9H0H3 589 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 PARVBQ9HBI1 364 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 ZDHHC18Q9NUE0 388 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 SLC17A6Q9P2U8 582 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 USP24Q9UPU5 2620 aa15.57■□□□□ 0.08
CD28-203ENST00000458610 SPEGQ15772 3267 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 CACNA1BQ00975 2339 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 FAM95CA0A1B0GW59 222 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 FAM159BA6NKW6 160 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 E7EQ34 232 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 EFSO43281 561 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 PRICKLE3O43900 615 aaPredicted RBP15.56■□□□□ 0.08
CD28-203ENST00000458610 ERGP11308 486 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 SAT1P21673 171 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 PEBP1P30086 187 aaKnown RBP15.56■□□□□ 0.08
CD28-203ENST00000458610 GP5P40197 560 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 ABATP80404 500 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 TIAL1Q01085 375 aaKnown RBP eCLIP15.56■□□□□ 0.08
CD28-203ENST00000458610 MC1RQ01726 317 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 POU4F1Q01851 419 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 NAB1Q13506 487 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.56■□□□□ 0.08
CD28-203ENST00000458610 GRTP1Q5TC63 336 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 ARHGAP40Q5TG30 622 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 TLDC1Q6P9B6 456 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 CDHR3Q6ZTQ4 885 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 TIPARPQ7Z3E1 657 aaKnown RBP15.56■□□□□ 0.08
CD28-203ENST00000458610 CTAGE3PQ8IX95 158 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 IFT20Q8IY31 132 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 SYTL1Q8IYJ3 562 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 NOA1Q8NC60 698 aaKnown RBP15.56■□□□□ 0.08
CD28-203ENST00000458610 GALNT6Q8NCL4 622 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 LRFN5Q96NI6 719 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 PCBD2Q9H0N5 130 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 POPDC3Q9HBV1 291 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 CPNE5Q9HCH3 593 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 LRRC4CQ9HCJ2 640 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 DMGDHQ9UI17 866 aaKnown RBP15.56■□□□□ 0.08
CD28-203ENST00000458610 KCND3Q9UK17 655 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 PSAT1Q9Y617 370 aa15.56■□□□□ 0.08
CD28-203ENST00000458610 ANKRD11Q6UB99 2663 aaPredicted RBP15.55■□□□□ 0.08
CD28-203ENST00000458610 OR2B3O76000 313 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 SLC16A8O95907 504 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 NTRK1P04629 796 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 ENO2P09104 434 aaPredicted RBP15.55■□□□□ 0.08
CD28-203ENST00000458610 ZNF28P17035 718 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 MAGP20916 626 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 SPRP35270 261 aaPredicted RBP15.55■□□□□ 0.08
CD28-203ENST00000458610 STAT5AP42229 794 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 GPX6P59796 221 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 RHDQ02161 417 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 FIGLAQ6QHK4 219 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 VASH2Q86V25 355 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 RELL1Q8IUW5 271 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 DNAJC22Q8N4W6 341 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 OR2L3Q8NG85 312 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 OR1L3Q8NH93 324 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 CLIP3Q96DZ5 547 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 ACTR5Q9H9F9 607 aaPredicted RBP15.55■□□□□ 0.08
CD28-203ENST00000458610 FAM60AQ9NP50 221 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 IRAK4Q9NWZ3 460 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 ANKMY1Q9P2S6 941 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 KLK4Q9Y5K2 254 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 BPTFQ12830 3046 aa15.55■□□□□ 0.08
CD28-203ENST00000458610 AHCTF1Q8WYP5 2266 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms