RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 PHOX2BQ99453 314 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 GATA5Q9BWX5 397 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 SRMSQ9H3Y6 488 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 LRIT1Q9P2V4 623 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 PCTPQ9UKL6 214 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 ZFHX2Q9C0A1 2572 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 A0A1W2PPV9 198 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 EME2A4GXA9 379 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 RHPN2P1A8MT19 583 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 K7EPI3 171 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 H2AFYO75367 372 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 PNLIPP16233 465 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 CCND1P24385 295 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 PLA2G5P39877 138 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 GDF5P43026 501 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 GPR3P46089 330 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 EPHA4P54764 986 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 NAGLUP54802 743 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 NAA20P61599 178 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 BIRC2Q13490 618 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 AASDHQ4L235 1098 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 CAPN13Q6MZZ7 669 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 ASCL5Q7RTU5 278 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 ZNF761Q86XN6 746 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 ADGRF3Q8IZF5 1079 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 LMNTD1Q8N9Z9 388 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 ZNF483Q8TF39 744 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 CKAP2Q8WWK9 683 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 PYCR2Q96C36 320 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 SLC38A3Q99624 504 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 TBC1D10AQ9BXI6 508 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 SLC32A1Q9H598 525 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 CCDC177Q9NQR7 707 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 INTS7Q9NVH2 962 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 ZNF292O60281 2723 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 ASXL3Q9C0F0 2248 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 PCM1Q15154 2024 aa16.05■□□□□ 0.16
CCDC90B-202ENST00000455220 BTN3A3O00478 584 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 KLF11O14901 512 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 PRICKLE3O43900 615 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 SERPINE1P05121 402 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 CKMT1AP12532 417 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 MYF5P13349 255 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 BGNP21810 368 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 CHI3L2Q15782 390 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 CES4AQ5XG92 561 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 TRIM42Q8IWZ5 723 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 DYDC1Q8WWB3 177 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 MED8Q96G25 268 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 OR4K3Q96R72 315 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 PITPNM3Q9BZ71 974 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 GSTO2Q9H4Y5 243 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 OPTCQ9UBM4 332 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 SLC22A14Q9Y267 594 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 RP1P56715 2156 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 NPHS1O60500 1241 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 CCNT2O60583 730 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 SUPT7LO94864 414 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 WDR47O94967 919 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 CHRM5P08912 532 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 GRK2P25098 689 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 PEBP1P30086 187 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 SERPINB5P36952 375 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 MDH1P40925 334 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 PIK3CGP48736 1102 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 SUSD1Q6UWL2 747 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 ZCCHC23Q6ZST2 131 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 FRMD7Q6ZUT3 714 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 MTERF4Q7Z6M4 381 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 TAX1BP1Q86VP1 789 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 THOC6Q86W42 341 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 CCNYL1Q8N7R7 359 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 SETD7Q8WTS6 366 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 NAT6Q93015 286 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 MOCOSQ96EN8 888 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 MAGEB18Q96M61 343 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 MIPEPQ99797 713 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 ZBTB26Q9HCK0 441 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 DNAJC11Q9NVH1 559 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 FAM186AA6NE01 2351 aa16.04■□□□□ 0.16
CCDC90B-202ENST00000455220 GVINP1Q7Z2Y8 2422 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 OR5K3A6NET4 321 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 C4orf47A7E2U8 309 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 UBXN7O94888 489 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 NPPBP16860 134 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 EPORP19235 508 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 CAPZBP47756 277 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 DUSP3P51452 185 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 CLCQ05315 142 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 GTF2H2Q13888 395 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 KIR2DS3Q14952 304 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 CFAP157Q5JU67 520 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 PRAMEF13Q5VWM6 474 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 GTF2H2CQ6P1K8 395 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 GUSBP11Q6P575 273 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 LCTLQ6UWM7 567 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 RGS9BPQ6ZS82 235 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 GOLGA7Q7Z5G4 137 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 OOSP2Q86WS3 158 aa16.03■□□□□ 0.16
CCDC90B-202ENST00000455220 NAXDQ8IW45 347 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms