RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 CHRNA4P43681 627 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 SULT1E1P49888 294 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 YWHAHQ04917 246 aaPredicted RBP18.21■□□□□ 0.51
PTPA-223ENST00000452489 HKDC1Q2TB90 917 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 ZNF648Q5T619 568 aaPredicted RBP18.21■□□□□ 0.51
PTPA-223ENST00000452489 FAM131AQ6UXB0 335 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 GPAT4Q86UL3 456 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 RASAL3Q86YV0 1011 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 SLAIN1Q8ND83 568 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 CLHC1Q8NHS4 586 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 GGHQ92820 318 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 KLHL15Q96M94 604 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 NT5C1AQ9BXI3 368 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 DCAF13Q9NV06 445 aaKnown RBP18.21■□□□□ 0.51
PTPA-223ENST00000452489 FEM1BQ9UK73 627 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 CLCA3PQ9Y6N3 262 aa18.21■□□□□ 0.51
PTPA-223ENST00000452489 ELOVL7A1L3X0 281 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 H3BM21 787 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 ARVCFO00192 962 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 F9P00740 461 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 CDK1P06493 297 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 NFKB2Q00653 900 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 EEF1DP3Q658K8 133 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 PLET1Q6UQ28 207 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 ABI3BPQ7Z7G0 1075 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 AADATQ8N5Z0 425 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 C7orf31Q8N865 590 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 NETO1Q8TDF5 533 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 GPRASP2Q96D09 838 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 ASIC4Q96FT7 647 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 HPDLQ96IR7 371 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 ATXN3LQ9H3M9 355 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 USP21Q9UK80 565 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 TRHDEQ9UKU6 1024 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 MIA3Q5JRA6 1907 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 PMPCBO75439 489 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 CAP2P40123 477 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 CCT3P49368 545 aaKnown RBP18.2■□□□□ 0.5
PTPA-223ENST00000452489 KCNQ1P51787 676 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 GRIK2Q13002 908 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 MAB21L1Q13394 359 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 PWP1Q13610 501 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 DOC2BQ14184 412 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 KYAT1Q16773 422 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.2■□□□□ 0.5
PTPA-223ENST00000452489 FAM217AQ8IXS0 508 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 PHACTR4Q8IZ21 702 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 PPHLN1Q8NEY8 458 aaKnown RBP18.2■□□□□ 0.5
PTPA-223ENST00000452489 GPR137Q96N19 417 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 TMEM209Q96SK2 561 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 CNPPD1Q9BV87 410 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 ZIM2Q9NZV7 527 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 PDP1Q9P0J1 537 aaPredicted RBP18.2■□□□□ 0.5
PTPA-223ENST00000452489 RIMKLBQ9ULI2 386 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 CSADQ9Y600 493 aa18.2■□□□□ 0.5
PTPA-223ENST00000452489 MUSKO15146 869 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 B4GALT5O43286 388 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 VPS4BO75351 444 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 GPX5O75715 221 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 RGS20O76081 388 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 NRG1Q02297 640 aaPredicted RBP18.19■□□□□ 0.5
PTPA-223ENST00000452489 OR4D1Q15615 310 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 TSTQ16762 297 aaKnown RBP18.19■□□□□ 0.5
PTPA-223ENST00000452489 NADSYN1Q6IA69 706 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 ZDHHC21Q8IVQ6 265 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 TAGAPQ8N103 731 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 DCBLD1Q8N8Z6 715 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 FAM129BQ96TA1 746 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 C1QTNF6Q9BXI9 259 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 TDRD3Q9H7E2 651 aaKnown RBP18.19■□□□□ 0.5
PTPA-223ENST00000452489 GALNT9Q9HCQ5 603 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 KRT84Q9NSB2 600 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 ZNF175Q9Y473 711 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 RPS10-NUDT3A0A1W2PQS6 291 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 FZD9O00144 591 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 GPC1P35052 558 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 PTPN5P54829 565 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 PSPHP78330 225 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 ANKRD54Q6NXT1 300 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 ZNF782Q6ZMW2 699 aaPredicted RBP18.19■□□□□ 0.5
PTPA-223ENST00000452489 DGLUCYQ7Z3D6 616 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 RAET1EQ8TD07 263 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 HYLS1Q96M11 299 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 OR5M11Q96RB7 305 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 GABARAPL1Q9H0R8 117 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 IL1RAPQ9NPH3 570 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 SLC35C2Q9NQQ7 365 aa18.19■□□□□ 0.5
PTPA-223ENST00000452489 MRPL39Q9NYK5 338 aaKnown RBP18.19■□□□□ 0.5
PTPA-223ENST00000452489 ZNF490Q9ULM2 529 aaPredicted RBP18.19■□□□□ 0.5
PTPA-223ENST00000452489 COL2A1P02458 1487 aaPredicted RBP18.19■□□□□ 0.5
PTPA-223ENST00000452489 MYL12BO14950 172 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 CREG1O75629 220 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 RFPL3O75679 317 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 ALDH1A1P00352 501 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 PROS1P07225 676 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 MTHFD2P13995 350 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 MYL12AP19105 171 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 GPR85P60893 370 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 ERVK-8P63133 956 aa18.18■□□□□ 0.5
PTPA-223ENST00000452489 LARS2Q15031 903 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms