RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 HAS2Q92819 552 aa4.74□□□□□ -1.65
SDCBP-205ENST00000447267 ZNF501Q96CX3 271 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-205ENST00000447267 SLC41A2Q96JW4 573 aa4.74□□□□□ -1.65
SDCBP-205ENST00000447267 SIGLEC12Q96PQ1 595 aa4.74□□□□□ -1.65
SDCBP-205ENST00000447267 REEP2Q9BRK0 252 aa4.74□□□□□ -1.65
SDCBP-205ENST00000447267 CUEDC2Q9H467 287 aa4.74□□□□□ -1.65
SDCBP-205ENST00000447267 ING3Q9NXR8 418 aa4.74□□□□□ -1.65
SDCBP-205ENST00000447267 SPO11Q9Y5K1 396 aa4.74□□□□□ -1.65
SDCBP-205ENST00000447267 CHD5Q8TDI0 1954 aa4.74□□□□□ -1.65
SDCBP-205ENST00000447267 A0A0D9SEW6 157 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 A0A1B0GTH9 108 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 C9J4A7 227 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 CES2O00748 559 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 TCF21O43680 179 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 SNX2O60749 519 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 RECQL5O94762 991 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-205ENST00000447267 PEX11BO96011 259 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 CBSLP0DN79 551 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 DLATP10515 647 aaKnown RBP4.73□□□□□ -1.65
SDCBP-205ENST00000447267 PTGER1P34995 402 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 CBSP35520 551 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 TRIM23P36406 574 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 ACY1Q03154 408 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 TAP2Q03519 686 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 ADCY2Q08462 1091 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 TRPC3Q13507 836 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 CLEC12BQ2HXU8 276 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 ATG9BQ674R7 924 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 IYDQ6PHW0 289 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 MARK2Q7KZI7 788 aaKnown RBP4.73□□□□□ -1.65
SDCBP-205ENST00000447267 SIAH3Q8IW03 269 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 SIRT6Q8N6T7 355 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 C4orf32Q8N8J7 132 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 FAM57AQ8TBR7 257 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 CPT1BQ92523 772 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 PTERQ96BW5 349 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 ARHGEF26Q96DR7 871 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 LRFN5Q96NI6 719 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 MNTQ99583 582 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 MLST8Q9BVC4 326 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 HES7Q9BYE0 225 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 WDR26Q9H7D7 661 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 UBTD1Q9HAC8 227 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 LPAR3Q9UBY5 353 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 CNOT8Q9UFF9 292 aaKnown RBP4.73□□□□□ -1.65
SDCBP-205ENST00000447267 TBC1D29Q9UFV1 150 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 ODF2LQ9ULJ1 636 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 PADI2Q9Y2J8 665 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 TMEM98Q9Y2Y6 226 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 PRKAB1Q9Y478 270 aa4.73□□□□□ -1.65
SDCBP-205ENST00000447267 TENM2Q9NT68 2774 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 TMEM89A2RUT3 159 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 TUBAL3A6NHL2 446 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 F5H5T6 163 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 SYT5O00445 386 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 STX6O43752 255 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 DNAJC6O75061 913 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 APOL3O95236 402 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 LDHAP00338 332 aaKnown RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 PRB2P02812 416 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 JUNP05412 331 aaKnown RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 HOXC4P09017 264 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 GAAP10253 952 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 TNNI1P19237 187 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 PTGS2P35354 604 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 ZFP36L2P47974 494 aaKnown RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 NANOS3P60323 173 aaKnown RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 TUBB4BP68371 445 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 BIRC3Q13489 604 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 TUBB2AQ13885 445 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 HYIQ5T013 277 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 ATXN7L2Q5T6C5 722 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 C1orf189Q5VU69 101 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 OTUD1Q5VV17 481 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 FBXL22Q6P050 247 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 PNCKQ6P2M8 343 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 FBXO42Q6P3S6 717 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 KIRREL2Q6UWL6 708 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 B4GALNT4Q76KP1 1039 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 ADGRG6Q86SQ4 1221 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 SLC9B2Q86UD5 537 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 ZNF354CQ86Y25 554 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 CMTM4Q8IZR5 234 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 OR7D4Q8NG98 312 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 OR2Y1Q8NGV0 311 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 PSMF1Q92530 271 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 SLCO2A1Q92959 643 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 KIAA1191Q96A73 305 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 HMCESQ96FZ2 354 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 TUBB2BQ9BVA1 445 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 STRA6Q9BX79 667 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 FRMD8Q9BZ67 464 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 ST6GALNAC4Q9H4F1 302 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 ACTR5Q9H9F9 607 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 PARVGQ9HBI0 331 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 KLHL1Q9NR64 748 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 ABCC13Q9NSE7 274 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 POT1Q9NUX5 634 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 KCND2Q9NZV8 630 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms