RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 STX16O14662 325 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 IRAK2O43187 625 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 NDUFS3O75489 264 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 GUCA1CO95843 209 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 APBA3O96018 575 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 PTHP01270 115 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 STSP08842 583 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 NRIP1P48552 1158 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 AFF1P51825 1210 aaKnown RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 VLDLRP98155 873 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 SLC14A1Q13336 389 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 STARD3Q14849 445 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 TYSND1Q2T9J0 566 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 PROX2Q3B8N5 592 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 ARMCX4Q5H9R4 360 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 ZNF648Q5T619 568 aaPredicted RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 SLC46A3Q7Z3Q1 461 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 SNX20Q7Z614 316 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 TSPYL5Q86VY4 417 aaPredicted RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 SIMC1Q8NDZ2 872 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 C16orf70Q9BSU1 422 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 KLHL20Q9Y2M5 609 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 MEIOCA2RUB1 952 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 CAPN5O15484 640 aaPredicted RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 KIAA0513O60268 411 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 TLR5O60602 858 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 SEC22BO75396 215 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 EFNA1P20827 205 aaPredicted RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 RFX2P48378 723 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 UGT2B15P54855 530 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 FAM189BP81408 668 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 CIR1Q86X95 450 aaPredicted RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 TRIM48Q8IWZ4 208 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 MYLPFQ96A32 169 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 ZNF382Q96SR6 550 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 NXF2Q9GZY0 626 aaKnown RBP13.62□□□□□ -0.23
VPS52-212ENST00000445902 RAD18Q9NS91 495 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 TOR4AQ9NXH8 423 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 MUTYHQ9UIF7 546 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 MKLN1Q9UL63 735 aa13.62□□□□□ -0.23
VPS52-212ENST00000445902 TRIP12Q14669 1992 aaPredicted RBP13.61□□□□□ -0.23
VPS52-212ENST00000445902 WDR90Q96KV7 1748 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 GRXCR2A6NFK2 248 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 GPR39O43194 453 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 FKBP9O95302 570 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 CYP2A7P20853 494 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 DDOSTP39656 456 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 NPRL3Q12980 569 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 ERAP2Q6P179 960 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 GOLGA7Q7Z5G4 137 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.61□□□□□ -0.23
VPS52-212ENST00000445902 UBASH3BQ8TF42 649 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 IPCEF1Q8WWN9 437 aaPredicted RBP13.61□□□□□ -0.23
VPS52-212ENST00000445902 CDKN2AIPNLQ96HQ2 116 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 SIGLEC11Q96RL6 698 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 MAGIXQ9H6Y5 334 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 TM9SF3Q9HD45 589 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 CRNNQ9UBG3 495 aaPredicted RBP13.61□□□□□ -0.23
VPS52-212ENST00000445902 OR7A17O14581 309 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 SLC10A3P09131 477 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 ADCYAP1R1P41586 468 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 CDKN2CP42773 168 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 IDH2P48735 452 aaKnown RBP13.61□□□□□ -0.23
VPS52-212ENST00000445902 ALFQ53S48 1182 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 MANEALQ5VSG8 457 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 SUSD1Q6UWL2 747 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 ARRDC2Q8TBH0 407 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 SMARCD1Q96GM5 515 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 B3GALT6Q96L58 329 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 SLC30A2Q9BRI3 323 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 POPDC3Q9HBV1 291 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 TIGARQ9NQ88 270 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 NPAP1Q9NZP6 1156 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 GABRQQ9UN88 632 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 ACTL7AQ9Y615 435 aa13.61□□□□□ -0.23
VPS52-212ENST00000445902 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.6□□□□□ -0.23
VPS52-212ENST00000445902 C12orf71A8MTZ7 269 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 ARHGAP33O14559 1287 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 TNFSF8P32971 234 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 GDF5P43026 501 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 TGM4P49221 684 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 ELP6Q0PNE2 266 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 CAMK2GQ13555 558 aaPredicted RBP13.6□□□□□ -0.23
VPS52-212ENST00000445902 BAK1Q16611 211 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 ARTNQ5T4W7 220 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 ZNF551Q7Z340 670 aaPredicted RBP13.6□□□□□ -0.23
VPS52-212ENST00000445902 NOXA1Q86UR1 476 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 OR4K2Q8NGD2 314 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 OR5H6Q8NGV6 325 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 SH3GL1Q99961 368 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 TSEN34Q9BSV6 310 aaKnown RBP13.6□□□□□ -0.23
VPS52-212ENST00000445902 IPPKQ9H8X2 491 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 PCDHGA6Q9Y5G7 932 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 HSPE1-MOB4S4R3N1 261 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 PNMA8CA0A1B0GUJ8 204 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 MUSKO15146 869 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 LRATO95237 230 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 TSPAN12O95859 305 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 CSF2P04141 144 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 ADORA3P0DMS8 318 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms