RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 MVB12BQ9H7P6 319 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 KCNK12Q9HB15 430 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 AHSPQ9NZD4 102 aa5.86□□□□□ -1.47
VPS50-205ENST00000441602 SRCAPQ6ZRS2 3230 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PDZK1P1A8MUH7 402 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 ENTPD5O75356 428 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 EEDO75530 441 aaKnown RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 PAK4O96013 591 aaPredicted RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 IL6P05231 212 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 SRFP11831 508 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PCNAP12004 261 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 JAK1P23458 1154 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 VARSP26640 1264 aaKnown RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 OXTRP30559 389 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 THOP1P52888 689 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 ADPRHP54922 357 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TAS2R38P59533 333 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PCDH1Q08174 1060 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 DMPKQ09013 629 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TDGQ13569 410 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 INPP5AQ14642 412 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 MUM1Q2TAK8 710 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PRAMEF14Q5SWL7 426 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 COL13A1Q5TAT6 717 aaPredicted RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 PRAMEF13Q5VWM6 474 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 LCTLQ6UWM7 567 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 LAYNQ6UX15 382 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 ZNF852Q6ZMS4 543 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 MSANTD1Q6ZTZ1 278 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 C17orf64Q86WR6 236 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TRIM69Q86WT6 500 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TBC1D21Q8IYX1 336 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 RGL4Q8IZJ4 473 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 MINDY1Q8N5J2 469 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 DCBLD1Q8N8Z6 715 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TP53I13Q8NBR0 393 aaPredicted RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 ERLEC1Q96DZ1 483 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 WDR92Q96MX6 357 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 OR2M4Q96R27 311 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 OSBPL6Q9BZF3 934 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 VCXQ9H320 206 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PELI2Q9HAT8 420 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 SLC2A4RGQ9NR83 387 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 HCN2Q9UL51 889 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 POMPQ9Y244 141 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 ASB1Q9Y576 335 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PTGDR2Q9Y5Y4 395 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 NPIPB8E9PQR5 432 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 K7ESM1 405 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 LSM1O15116 133 aaKnown RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 LILRB5O75023 590 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 KRT36O76013 467 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 C1GALT1C1LP0DN25 315 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PRPH2P23942 346 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 IMPA1P29218 277 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 S100A3P33764 101 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TRIM23P36406 574 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 CASP2P42575 452 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 DGKEP52429 567 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 EEFSECP57772 596 aaKnown RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 LRP8Q14114 963 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 RCAN2Q14206 197 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 NFE2L1Q14494 772 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TMEM259Q4ZIN3 620 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 HABP4Q5JVS0 413 aaKnown RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 Q6ZSR9 355 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 DHDDSQ86SQ9 333 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 SPATA24Q86W54 205 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PLA2G15Q8NCC3 412 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 FBXO27Q8NI29 283 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 FAM174AQ8TBP5 190 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 SLC5A11Q8WWX8 675 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 FAM131CQ96AQ9 280 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PYCR2Q96C36 320 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 CLPTM1LQ96KA5 538 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 QRFPRQ96P65 431 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 FERD3LQ96RJ6 166 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 UHRF1Q96T88 793 aaPredicted RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 AIF1LQ9BQI0 150 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 PITHD1Q9GZP4 211 aaPredicted RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 BRF2Q9HAW0 419 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 ZNF225Q9UK10 706 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TDRKHQ9Y2W6 561 aaKnown RBP5.85□□□□□ -1.47
VPS50-205ENST00000441602 GPSM3Q9Y4H4 160 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 ATG2AQ2TAZ0 1938 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 DOCK8Q8NF50 2099 aa5.85□□□□□ -1.47
VPS50-205ENST00000441602 TCRBV21S2A2A0A5A6 115 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 H0YIV9 168 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 KCNH1O95259 989 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 APBB3O95704 486 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 PDYNP01213 254 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ACP5P13686 325 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 HNRNPA2B1P22626 353 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 HPCAL1P37235 193 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 DIO3P55073 304 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 PFN3P60673 137 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 TBPL1P62380 186 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 YPEL5P62699 121 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 PRKCQQ04759 706 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 LRRC74AQ0VAA2 488 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms