RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TRIM40Q6P9F5 258 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 RSPO2Q6UXX9 243 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 HTR3DQ70Z44 454 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 DHRSXQ8N5I4 330 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SLC43A3Q8NBI5 491 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 KCT2Q8NC54 265 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CDKN2AIPNLQ96HQ2 116 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 C1orf74Q96LT6 269 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 FCRL5Q96RD9 977 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 GFM1Q96RP9 751 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 C1orf50Q9BV19 199 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 KLF16Q9BXK1 252 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 RMND5AQ9H871 391 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 FBRSQ9HAH7 460 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 MRPS30Q9NP92 439 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 RAB26Q9ULW5 256 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 FAM149AA5PLN7 773 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ANKRD33BA6NCL7 494 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 STK16O75716 305 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 TMEM115Q12893 351 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 PTPRCAPQ14761 206 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ZIK1Q3SY52 487 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 GPR33Q49SQ1 333 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 GPRC6AQ5T6X5 926 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 XKR5Q6UX68 686 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SPRED2Q7Z698 418 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 STK32CQ86UX6 486 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 PARP8Q8N3A8 854 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 RELTQ969Z4 430 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ESAMQ96AP7 390 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 TBCDQ9BTW9 1192 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 GAREM1Q9H706 876 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 FAM86C1Q9NVL1 165 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 KLHL28Q9NXS3 571 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SCML1Q9UN30 329 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CDC14AQ9UNH5 594 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CA5BQ9Y2D0 317 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 TRAF6Q9Y4K3 522 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CACNA1BQ00975 2339 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 NPEPPSL1A6NEC2 478 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ASNA1O43681 348 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 NRP2O60462 931 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 LDLRP01130 860 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 LINC00032P0C843 101 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 EPORP19235 508 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 VARSP26640 1264 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 IL12RB1P42701 662 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SLC16A1P53985 500 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ATP6V0D1P61421 351 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ADAM15Q13444 863 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SLC9A5Q14940 896 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 INO80DQ53TQ3 878 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 PYCR2Q96C36 320 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 TRMT2BQ96GJ1 504 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 PLEKHA8Q96JA3 519 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 NSMCE2Q96MF7 247 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 PRICKLE1Q96MT3 831 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 COQ7Q99807 217 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 XKR8Q9H6D3 395 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SGK2Q9HBY8 427 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ZDHHC3Q9NYG2 299 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SVILO95425 2214 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ARHGEF9O43307 516 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 SMAD6O43541 496 aaKnown RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 DUX1O43812 170 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 GMFGO60234 142 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 SORBS2O94875 1100 aaKnown RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ABLIM3O94929 683 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 LATS1O95835 1130 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 DHRS4L1P0CG22 281 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 LBPP18428 481 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 CCNA2P20248 432 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 MAGP20916 626 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 NT5EP21589 574 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 S100A5P33763 92 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 PTGER3P43115 390 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 AVPR1BP47901 424 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 VAC14Q08AM6 782 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ILF2Q12905 390 aaKnown RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 SIRPB2Q5JXA9 342 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF648Q5T619 568 aaPredicted RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 GALNT18Q6P9A2 607 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 LRTOMTQ8WZ04 291 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 FIG4Q92562 907 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 OSBPL11Q9BXB4 747 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 HMG20AQ9NP66 347 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 PRDM6Q9NQX0 595 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 DNAJC11Q9NVH1 559 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ATP6V1HQ9UI12 483 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 KCTD3Q9Y597 815 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 GPC6Q9Y625 555 aaPredicted RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 GMEB1Q9Y692 573 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 A0A1B0GVT2 93 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 TMEM150CB9EJG8 249 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 PRAMEF26H0Y7S4 382 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 GTPBP1O00178 669 aaKnown RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 PI15O43692 258 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF682O95780 498 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 MT-ND1P03886 318 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms