RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 KMOO15229 486 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 NARSO43776 548 aaKnown RBP25.72■■□□□ 1.71
LDB1-202ENST00000425280 EEDO75530 441 aaKnown RBP25.72■■□□□ 1.71
LDB1-202ENST00000425280 GPR89BP0CG08 455 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 MYCLP1P12525 358 aaPredicted RBP25.72■■□□□ 1.71
LDB1-202ENST00000425280 MAT2AP31153 395 aaKnown RBP25.72■■□□□ 1.71
LDB1-202ENST00000425280 IGFALSP35858 605 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 MS4A2Q01362 244 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 SLC34A1Q06495 639 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 PCDH1Q08174 1060 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 PRKG2Q13237 762 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 DOC2AQ14183 400 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 AAGABQ6PD74 315 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 HIPK4Q8NE63 616 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 EBF2Q9HAK2 575 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 ASIC5Q9NY37 505 aa25.72■■□□□ 1.71
LDB1-202ENST00000425280 SERTM1A2A2V5 107 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 FXYD1O00168 92 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 SESN3P58005 492 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 AP2B1P63010 937 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 METRNLQ641Q3 311 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 SYTL1Q8IYJ3 562 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 PLCD3Q8N3E9 789 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 SLC26A7Q8TE54 656 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 MRGPRX1Q96LB2 322 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 S100A14Q9HCY8 104 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 STOML1Q9UBI4 398 aa25.71■■□□□ 1.71
LDB1-202ENST00000425280 CLGNO14967 610 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 RSL1D1O76021 490 aaKnown RBP25.7■■□□□ 1.71
LDB1-202ENST00000425280 FUCA1P04066 466 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 C7P10643 843 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 JAK1P23458 1154 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 PTDSS1P48651 473 aaKnown RBP25.7■■□□□ 1.71
LDB1-202ENST00000425280 TBPL1P62380 186 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 PPP2CBP62714 309 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 PPP2CAP67775 309 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 KIAA0040Q15053 153 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 TLR1Q15399 786 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 TIGD2Q4W5G0 525 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 TMEM92Q6UXU6 159 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 USP30Q70CQ3 517 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 FAM124AQ86V42 546 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 FAM156AQ8NDB6 213 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 PYDC1Q8WXC3 89 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 HOPXQ9BPY8 73 aaPredicted RBP25.7■■□□□ 1.71
LDB1-202ENST00000425280 C1QTNF7Q9BXJ2 289 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 GID8Q9NWU2 228 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 ASF1AQ9Y294 204 aa25.7■■□□□ 1.71
LDB1-202ENST00000425280 PAGE3Q5JUK9 113 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 GRHL2Q6ISB3 625 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 CAPN13Q6MZZ7 669 aaPredicted RBP25.7■■□□□ 1.7
LDB1-202ENST00000425280 LIX1Q8N485 282 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 LMNTD1Q8N9Z9 388 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 UBE2ZQ9H832 354 aaPredicted RBP25.7■■□□□ 1.7
LDB1-202ENST00000425280 FZD3Q9NPG1 666 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 MRPL40Q9NQ50 206 aaKnown RBP25.7■■□□□ 1.7
LDB1-202ENST00000425280 ITM2CQ9NQX7 267 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 CD300AQ9UGN4 299 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 PSMD13Q9UNM6 376 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 NCKAP1Q9Y2A7 1128 aa25.7■■□□□ 1.7
LDB1-202ENST00000425280 ANPEPP15144 967 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 TCN1P20061 433 aaPredicted RBP25.69■■□□□ 1.7
LDB1-202ENST00000425280 PRPH2P23942 346 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 SLC7A2P52569 658 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 FLOT2Q14254 428 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 PTGR1Q14914 329 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 CACHD1Q5VU97 1274 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 KBTBD6Q86V97 674 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.69■■□□□ 1.72e-6■■□□□ 13.2
LDB1-202ENST00000425280 LRRC56Q8IYG6 542 aaPredicted RBP25.69■■□□□ 1.7
LDB1-202ENST00000425280 MINDY1Q8N5J2 469 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 PHC3Q8NDX5 983 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 OR5AR1Q8NGP9 310 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 LRRC58Q96CX6 371 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 SGPP1Q9BX95 441 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 CD93Q9NPY3 652 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 LEF1Q9UJU2 399 aaPredicted RBP25.69■■□□□ 1.7
LDB1-202ENST00000425280 MYO10Q9HD67 2058 aa25.69■■□□□ 1.7
LDB1-202ENST00000425280 PRORSD1PA6NEY8 169 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 ACOT8O14734 319 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 GLULP15104 373 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 GCKP35557 465 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 SUSD1Q6UWL2 747 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 WDR20Q8TBZ3 569 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 NUDT8Q8WV74 236 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 TFGQ92734 400 aaPredicted RBP25.68■■□□□ 1.7
LDB1-202ENST00000425280 TACO1Q9BSH4 297 aaKnown RBP25.68■■□□□ 1.7
LDB1-202ENST00000425280 GPRC5BQ9NZH0 403 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 KCNE2Q9Y6J6 123 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 NPIPB8E9PQR5 432 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 MAP3K7O43318 606 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 ACADMP11310 421 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 NDUFV2P19404 249 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 HNF4AP41235 474 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 TAP2Q03519 686 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 CCINQ13939 588 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 CAPRIN1Q14444 709 aaKnown RBP25.68■■□□□ 1.7
LDB1-202ENST00000425280 EOGTQ5NDL2 527 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 PRMT9Q6P2P2 845 aa25.68■■□□□ 1.7
LDB1-202ENST00000425280 KIAA1324Q6UXG2 1013 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms