RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 RBM20Q5T481 1227 aaKnown RBP18.01■□□□□ 0.47
PRNP-202ENST00000424424 HECTD2Q5U5R9 776 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 CYHR1Q6ZMK1 362 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 CAPN12Q6ZSI9 719 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 UBE2R2Q712K3 238 aaPredicted RBP18.01■□□□□ 0.47
PRNP-202ENST00000424424 MYO1HQ8N1T3 1032 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 FBXO15Q8NCQ5 510 aaPredicted RBP18.01■□□□□ 0.47
PRNP-202ENST00000424424 OR1L3Q8NH93 324 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 FBXO25Q8TCJ0 367 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 ASB11Q8WXH4 323 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 CDKL2Q92772 493 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 CLIP3Q96DZ5 547 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 SLC45A3Q96JT2 553 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 LRRC1Q9BTT6 524 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 LHX9Q9NQ69 397 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 SLC17A6Q9P2U8 582 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 KCND3Q9UK17 655 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 VWA7Q9Y334 891 aa18.01■□□□□ 0.47
PRNP-202ENST00000424424 ZNF891A8MT65 544 aaPredicted RBP18■□□□□ 0.47
PRNP-202ENST00000424424 GFYI3L273 518 aa18■□□□□ 0.47
PRNP-202ENST00000424424 ERVH48-1M5A8F1 160 aa18■□□□□ 0.47
PRNP-202ENST00000424424 MYO1CO00159 1063 aa18■□□□□ 0.47
PRNP-202ENST00000424424 SYF2O95926 243 aaKnown RBP18■□□□□ 0.47
PRNP-202ENST00000424424 HBQ1P09105 142 aa18■□□□□ 0.47
PRNP-202ENST00000424424 GSTA2P09210 222 aa18■□□□□ 0.47
PRNP-202ENST00000424424 MAGP20916 626 aa18■□□□□ 0.47
PRNP-202ENST00000424424 CDKN2DP55273 166 aa18■□□□□ 0.47
PRNP-202ENST00000424424 SLC7A5Q01650 507 aa18■□□□□ 0.47
PRNP-202ENST00000424424 MC1RQ01726 317 aa18■□□□□ 0.47
PRNP-202ENST00000424424 NAA25Q14CX7 972 aa18■□□□□ 0.47
PRNP-202ENST00000424424 EEF1AKMT2Q5JPI9 291 aaKnown RBP18■□□□□ 0.47
PRNP-202ENST00000424424 PAQR3Q6TCH7 311 aa18■□□□□ 0.47
PRNP-202ENST00000424424 STRA8Q7Z7C7 330 aa18■□□□□ 0.47
PRNP-202ENST00000424424 CCDC25Q86WR0 208 aa18■□□□□ 0.47
PRNP-202ENST00000424424 LMNTD1Q8N9Z9 388 aa18■□□□□ 0.47
PRNP-202ENST00000424424 DENND1AQ8TEH3 1009 aa18■□□□□ 0.47
PRNP-202ENST00000424424 EEF1AKMT1Q8WVE0 214 aa18■□□□□ 0.47
PRNP-202ENST00000424424 ZUFSPQ96AP4 578 aa18■□□□□ 0.47
PRNP-202ENST00000424424 PKP4Q99569 1192 aa18■□□□□ 0.47
PRNP-202ENST00000424424 FAM60AQ9NP50 221 aa18■□□□□ 0.47
PRNP-202ENST00000424424 TXNDC16Q9P2K2 825 aa18■□□□□ 0.47
PRNP-202ENST00000424424 PLCL2Q9UPR0 1127 aa18■□□□□ 0.47
PRNP-202ENST00000424424 CTAGE15A4D2H0 777 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 KRT87PA6NCN2 255 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 PABPN1LA6NDY0 278 aaKnown RBP17.99■□□□□ 0.47
PRNP-202ENST00000424424 TARM1B6A8C7 271 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 PRICKLE3O43900 615 aaPredicted RBP17.99■□□□□ 0.47
PRNP-202ENST00000424424 OR2B3O76000 313 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 C8GP07360 202 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 CTAGE8P0CG41 777 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 ERGP11308 486 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 WT1P19544 449 aaPredicted RBP17.99■□□□□ 0.47
PRNP-202ENST00000424424 TCN2P20062 427 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 CMPK1P30085 196 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 SSTR1P30872 391 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 PNLIPRP1P54315 467 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 IL2P60568 153 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 ZIC1Q15915 447 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 TAF1BQ53T94 588 aaPredicted RBP17.99■□□□□ 0.47
PRNP-202ENST00000424424 ZC3H12BQ5HYM0 836 aaKnown RBP17.99■□□□□ 0.47
PRNP-202ENST00000424424 KIAA1614Q5VZ46 1190 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 FIGLAQ6QHK4 219 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 C3orf62Q6ZUJ4 267 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 PIWIL4Q7Z3Z4 852 aaKnown RBP17.99■□□□□ 0.47
PRNP-202ENST00000424424 CTAGE6Q86UF2 777 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 CTAGE4Q8IX94 777 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 FAM20CQ8IXL6 584 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 MMGT1Q8N4V1 131 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 MCOLN3Q8TDD5 553 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 SMPDL3AQ92484 453 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 LRFN5Q96NI6 719 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 ACTR5Q9H9F9 607 aaPredicted RBP17.99■□□□□ 0.47
PRNP-202ENST00000424424 IRAK4Q9NWZ3 460 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 CROTQ9UKG9 612 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 AP1M2Q9Y6Q5 423 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 NBEAQ8NFP9 2946 aa17.99■□□□□ 0.47
PRNP-202ENST00000424424 FDXRP22570 491 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 RPA3P35244 121 aaPredicted RBP17.98■□□□□ 0.47
PRNP-202ENST00000424424 TIAL1Q01085 375 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRNP-202ENST00000424424 SP140Q13342 867 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 TSTA3Q13630 321 aaPredicted RBP17.98■□□□□ 0.47
PRNP-202ENST00000424424 FASTKQ14296 549 aaKnown RBP17.98■□□□□ 0.47
PRNP-202ENST00000424424 DEFB110Q30KQ9 67 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 CYS1Q717R9 158 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 ZC3HC1Q86WB0 502 aaKnown RBP17.98■□□□□ 0.47
PRNP-202ENST00000424424 SYTL1Q8IYJ3 562 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 DNAJC22Q8N4W6 341 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 LSM14AQ8ND56 463 aaKnown RBP17.98■□□□□ 0.47
PRNP-202ENST00000424424 OR2A1Q8NGT9 310 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 MR1Q95460 341 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 LINGO1Q96FE5 620 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 MIPEPQ99797 713 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 SLC12A9Q9BXP2 914 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 SPTBP11277 2137 aa17.98■□□□□ 0.47
PRNP-202ENST00000424424 ANKRD12Q6UB98 2062 aa17.97■□□□□ 0.47
PRNP-202ENST00000424424 EIF4E1BA6NMX2 242 aaKnown RBP17.97■□□□□ 0.47
PRNP-202ENST00000424424 C21orf140B9A014 251 aa17.97■□□□□ 0.47
PRNP-202ENST00000424424 SLC16A5O15375 505 aa17.97■□□□□ 0.47
PRNP-202ENST00000424424 ZNF749O43361 778 aa17.97■□□□□ 0.47
PRNP-202ENST00000424424 KATNA1O75449 491 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms