RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 C1orf74Q96LT6 269 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 PKMYT1Q99640 499 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 NXF2Q9GZY0 626 aaKnown RBP16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 TNKS2Q9H2K2 1166 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 SERHLQ9NQF3 203 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 PLSCR3Q9NRY6 295 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 ERVK13-1Q9NX77 482 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 PPP2R3BQ9Y5P8 575 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 TNFRSF10BO14763 440 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 ZW10O43264 779 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 RAMP2O60895 175 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 IL6P05231 212 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 ARPC4P59998 168 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 ASCC1Q8N9N2 400 aaKnown RBP16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 FATE1Q969F0 183 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 RMDN1Q96DB5 314 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 SLC10A4Q96EP9 437 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 SERPINB11Q96P15 392 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 TRIB3Q96RU7 358 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 ACBD6Q9BR61 282 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 TRIM62Q9BVG3 475 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 FKBPLQ9UIM3 349 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 VPS4AQ9UN37 437 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 KCNH4Q9UQ05 1017 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 MN1Q10571 1320 aaPredicted RBP16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 SCO2O43819 266 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 TLL1O43897 1013 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 TLR5O60602 858 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 TBX18O95935 607 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 OR4Q2P0C623 313 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 PAX3P23760 479 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 ARHGDIAP52565 204 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 SERINC3Q13530 473 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 BCL7AQ4VC05 210 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 GPR153Q6NV75 609 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 IPCEF1Q8WWN9 437 aaPredicted RBP16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 NEDD4LQ96PU5 975 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 CHCHD6Q9BRQ6 235 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 NUAK2Q9H093 628 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 IL1RAPQ9NPH3 570 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 ELOVL2Q9NXB9 296 aa16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 SAMHD1Q9Y3Z3 626 aaKnown RBP16.26■□□□□ 0.19
NPC1L1-203ENST00000423141 E5RI56 91 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 F8W810 466 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 B3GAT3O94766 335 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 CHRNB1P11230 501 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 NUDT6P53370 316 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 CYP4F2P78329 520 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 MRPS15P82914 257 aaKnown RBP16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 IL10RBQ08334 325 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 NPRL3Q12980 569 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 TP53BP2Q13625 1128 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 TCAIMQ8N3R3 496 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 BEND7Q8N7W2 519 aaPredicted RBP16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 MTFMTQ96DP5 389 aaKnown RBP16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 CDCA5Q96FF9 252 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 ZNF408Q9H9D4 720 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 TM9SF3Q9HD45 589 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 FNIP2Q9P278 1114 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 ARL5CA6NH57 179 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 MED26O95402 600 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 HMBSP08397 361 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 PRKCAP17252 672 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 DNAJA1P31689 397 aaKnown RBP16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 MC4RP32245 332 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 RGRP47804 291 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 E2F2Q14209 437 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 PCBP2Q15366 365 aaKnown RBP eCLIP16.25■□□□□ 0.198e-6■■□□□ 13.7
NPC1L1-203ENST00000423141 UPP1Q16831 310 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 PARP15Q460N3 678 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 CCDC58Q4VC31 144 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 SBSNQ6UWP8 590 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 SLC46A3Q7Z3Q1 461 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 SCN4BQ8IWT1 228 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 OR7G1Q8NGA0 311 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 SLC39A13Q96H72 371 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 ABCG8Q9H221 673 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 NUDT4Q9NZJ9 180 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 ZNF451Q9Y4E5 1061 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 PCDHGA6Q9Y5G7 932 aa16.25■□□□□ 0.19
NPC1L1-203ENST00000423141 SLC12A8A0AV02 714 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 H3BQ06 376 aaPredicted RBP16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 OTCP00480 354 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 IL1RNP18510 177 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 FPR1P21462 350 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 PTPN6P29350 595 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 TBX4P57082 545 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 ZRANB3Q5FWF4 1079 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 SNAP47Q5SQN1 464 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 NRARPQ7Z6K4 114 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 HORMAD1Q86X24 394 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 UBQLNLQ8IYU4 475 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 RGL4Q8IZJ4 473 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 TTYH2Q9BSA4 534 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 CCDC177Q9NQR7 707 aaPredicted RBP16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 TBC1D24Q9ULP9 559 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 TLR6Q9Y2C9 796 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 CTDSP2O14595 271 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 TAPBPO15533 448 aa16.24■□□□□ 0.19
NPC1L1-203ENST00000423141 RGS14O43566 566 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms