RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 FAM172BPA6NC97 362 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 FAM171A2A8MVW0 826 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 LACTBL1A8MY62 500 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 IFRD1O00458 451 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 PPEF2O14830 753 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 DPM1O60762 260 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 HLA-DRAP01903 254 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 PLA2G1BP04054 148 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 RPLP0P05388 317 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 PDHA1P08559 390 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 GAAP10253 952 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 MCF2P10911 925 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 TYK2P29597 1187 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 GPD2P43304 727 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 NAMPTP43490 491 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC6A9P48067 706 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 ETV1P50549 477 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 RASSF2P50749 326 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 MAP2K6P52564 334 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 AGFG1P52594 562 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 EFNA5P52803 228 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 IST1P53990 364 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 ADPRHP54922 357 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 MAP3K7CLP57077 242 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 BPIFB3P59826 476 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 HNRNPKP61978 463 aaKnown RBP eCLIP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 MYL5Q02045 173 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 RAD51Q06609 339 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 KLHL30Q0D2K2 578 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 AP1B1Q10567 949 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 CTTNQ14247 550 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 STK38Q15208 465 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 CYTH1Q15438 398 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 RGS21Q2M5E4 152 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 DEFB133Q30KQ1 61 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 CFAP221Q4G0U5 840 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 C6orf183Q5T699 404 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 SHEQ5VZ18 495 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 LRRC8BQ6P9F7 803 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 UNC5DQ6UXZ4 953 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 Q6ZVL8 140 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 FRA10AC1Q70Z53 315 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 MAEAQ7L5Y9 396 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 TBC1D1Q86TI0 1168 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 FAM129CQ86XR2 697 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF677Q86XU0 584 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 CLVS1Q8IUQ0 354 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 C12orf56Q8IXR9 622 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF366Q8N895 744 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 TC2NQ8N9U0 490 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 MCPH1Q8NEM0 835 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 TMEM158Q8WZ71 300 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 HSPH1Q92598 858 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 ZBTB8AQ96BR9 441 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 SPATA17Q96L03 361 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 WDR92Q96MX6 357 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 ZIM3Q96PE6 472 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 MED15Q96RN5 788 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 SERINC2Q96SA4 455 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 DMRTA2Q96SC8 542 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 OMDQ99983 421 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 CALN1Q9BXU9 219 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 GON7Q9BXV9 100 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 CCSER1Q9C0I3 900 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 NEUROG2Q9H2A3 272 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 KCNN2Q9H2S1 579 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 FANCEQ9HB96 536 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 C12orf4Q9NQ89 552 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 PRSS16Q9NQE7 514 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 POLE3Q9NRF9 147 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 ASF1BQ9NVP2 202 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 IL37Q9NZH6 218 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 AKAP7Q9P0M2 348 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 GNPTGQ9UJJ9 305 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 NUP50Q9UKX7 468 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 SNX7Q9UNH6 387 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 SIK3Q9Y2K2 1263 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 SNX8Q9Y5X2 465 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 CSNK1G3Q9Y6M4 447 aa5.39□□□□□ -1.55
ECHDC1-206ENST00000417628 MYOFQ9NZM1 2061 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SYNJ2BP-COX16A0A087WUM0 186 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 A0A1B0GUH1 482 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 FAM227AF5H4B4 570 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 PRAMEF26H0Y7S4 382 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 RNF103O00237 685 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CYB561D2O14569 222 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 POLR1CO15160 346 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 MID1O15344 667 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 AQP9O43315 295 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 COCHO43405 550 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CCNT1O60563 726 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 KLHL18O94889 574 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 SUN1O94901 812 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 UNC5CO95185 931 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 TDP2O95551 362 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 KRT75O95678 551 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 CHEK2O96017 543 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 KRT16P08779 473 aa5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-206ENST00000417628 PRKACAP17612 351 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms