RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 TLE4Q04727 773 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.17□□□□□ -0.31e-6■□□□□ 10.6
SSB-204ENST00000417292 BBS12Q6ZW61 710 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 CEP97Q8IW35 865 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 LRRC8AQ8IWT6 810 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 DTWD1Q8N5C7 304 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 IPMKQ8NFU5 416 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 OR4K2Q8NGD2 314 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 OR5AR1Q8NGP9 310 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 ADAMTS18Q8TE60 1221 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 DLG3Q92796 817 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 DCUN1D1Q96GG9 259 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 OSBPL8Q9BZF1 889 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 FAM96AQ9H5X1 160 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 MCCC2Q9HCC0 563 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 SEMA3GQ9NS98 782 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 ABI3Q9P2A4 366 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 PTGFRNQ9P2B2 879 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 KLHL20Q9Y2M5 609 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
SSB-204ENST00000417292 DYTNA2CJ06 578 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 VSTM2BA6NLU5 285 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 H7C0C1 242 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 SLC19A2O60779 497 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 HPP00738 406 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 ATP1B2P14415 290 aaPredicted RBP13.16□□□□□ -0.3
SSB-204ENST00000417292 SHMT2P34897 504 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 ATP5OP48047 213 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 C3AR1Q16581 482 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 BZW1Q7L1Q6 419 aaKnown RBP13.16□□□□□ -0.3
SSB-204ENST00000417292 MMP21Q8N119 569 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 ACTL9Q8TC94 416 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 BRIX1Q8TDN6 353 aaKnown RBP13.16□□□□□ -0.3
SSB-204ENST00000417292 HAS2Q92819 552 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 C8orf44Q96CB5 159 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
SSB-204ENST00000417292 CRLS1Q9UJA2 301 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 TINAGQ9UJW2 476 aa13.16□□□□□ -0.3
SSB-204ENST00000417292 DSCR3O14972 297 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 CLDN14O95500 239 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 PRR35P0CG20 571 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 RALBP11234 206 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 PIM1P11309 404 aaPredicted RBP13.15□□□□□ -0.3
SSB-204ENST00000417292 MAGP20916 626 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 MCM3P25205 808 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 RBL1P28749 1068 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 OR1D4P47884 311 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 ARSFP54793 590 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 COPS2P61201 443 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 CCZ1BP86790 482 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
SSB-204ENST00000417292 RPA4Q13156 261 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 MCATQ8IVS2 390 aaKnown RBP13.15□□□□□ -0.3
SSB-204ENST00000417292 KBTBD2Q8IY47 623 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 SYCE1Q8N0S2 351 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 ZNF567Q8N184 647 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 METTL27Q8N6F8 245 aaPredicted RBP13.15□□□□□ -0.3
SSB-204ENST00000417292 SIRT6Q8N6T7 355 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 ACBD4Q8NC06 268 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
SSB-204ENST00000417292 CHTF18Q8WVB6 975 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 QKIQ96PU8 341 aaKnown RBP eCLIP13.15□□□□□ -0.3
SSB-204ENST00000417292 FCRL5Q96RD9 977 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 COPS8Q99627 209 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 SPOCK3Q9BQ16 436 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 LZTFL1Q9NQ48 299 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 CUTCQ9NTM9 273 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 OR6C2Q9NZP2 312 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 KLHL8Q9P2G9 620 aaPredicted RBP13.15□□□□□ -0.3
SSB-204ENST00000417292 NXT1Q9UKK6 140 aaKnown RBP13.15□□□□□ -0.3
SSB-204ENST00000417292 PLAGL1Q9UM63 463 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 VPS13CQ709C8 3753 aa13.15□□□□□ -0.3
SSB-204ENST00000417292 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 APOC4-APOC2K7ER74 178 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 USP1O94782 785 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 RASAL1O95294 804 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 NADKO95544 446 aaPredicted RBP13.14□□□□□ -0.31
SSB-204ENST00000417292 AGTP01019 485 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 CRYABP02511 175 aaKnown RBP13.14□□□□□ -0.31
SSB-204ENST00000417292 APOC2P02655 101 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 ESRRAP11474 423 aaPredicted RBP13.14□□□□□ -0.31
SSB-204ENST00000417292 ACPPP15309 386 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 CD1EP15812 388 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
SSB-204ENST00000417292 CDKN1CP49918 316 aaPredicted RBP13.14□□□□□ -0.31
SSB-204ENST00000417292 SMSP52788 366 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 EIF3EP60228 445 aaKnown RBP13.14□□□□□ -0.31
SSB-204ENST00000417292 PMP22Q01453 160 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 RBPJQ06330 500 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 KLC1Q07866 573 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 TAF1AQ15573 450 aaPredicted RBP13.14□□□□□ -0.31
SSB-204ENST00000417292 ATG9BQ674R7 924 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 NCCRP1Q6ZVX7 275 aaPredicted RBP13.14□□□□□ -0.31
SSB-204ENST00000417292 PID1Q7Z2X4 250 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 CLDN19Q8N6F1 224 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 UBL4BQ8N7F7 174 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 AMER2Q8N7J2 671 aa13.14□□□□□ -0.31
SSB-204ENST00000417292 OR13C4Q8NGS5 318 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms