RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PIM1P11309 404 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 OGNP20774 298 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 ALAS2P22557 587 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 BDKRB1P46663 353 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 GCGRP47871 477 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 GPS1Q13098 491 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 NADK2Q4G0N4 442 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 TCTE1Q5JU00 501 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 YOD1Q5VVQ6 348 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 FCRL6Q6DN72 434 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 MRPL14Q6P1L8 145 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 MRGPREQ86SM8 312 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 RASGEF1CQ8N431 466 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 EFCAB3Q8N7B9 438 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 OR2Y1Q8NGV0 311 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 HMGCLL1Q8TB92 370 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 LPGAT1Q92604 370 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 PBKQ96KB5 322 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 NUDT9Q9BW91 350 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 GPR83Q9NYM4 423 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 VPS9D1Q9Y2B5 631 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 PCM1Q15154 2024 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 A6NL46 340 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 GOLGA8KD6RF30 607 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 GOLGA8TH3BQL2 631 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 KLHL41O60662 606 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 ONECUT2O95948 504 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 CHRM3P20309 590 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 ATP5DP30049 168 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 GRIA3P42263 894 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 VPS41P49754 854 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 TERF1P54274 439 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 GRM7Q14831 915 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 CASC4Q6P4E1 433 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 TTLL10Q6ZVT0 673 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 TTC29Q8NA56 475 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 CPT1CQ8TCG5 803 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 MAGOHBQ96A72 148 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 SMAD5Q99717 465 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 ENAMQ9NRM1 1142 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 SPATA7Q9P0W8 599 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 SAMD15Q9P1V8 674 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 C5AR2Q9P296 337 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 CRYL1Q9Y2S2 319 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 JRKLQ9Y4A0 524 aa16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 UBR5O95071 2799 aaPredicted RBP16.88■□□□□ 0.29
PDLIM2-208ENST00000416159 A0A1B0GX78 115 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 SDR42E2A6NKP2 422 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 SRPX2O60687 465 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 CNOT3O75175 753 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 NIPSNAP2O75323 286 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 AVILO75366 819 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 MATN4O95460 622 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 ALBP02768 609 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 ATXN8OSP0DMR3 200 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 MLNP12872 115 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 PKMP14618 531 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 GBX1Q14549 363 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 SLC9A5Q14940 896 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 FAM214AQ32MH5 1076 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 CCSMST1Q4G0I0 132 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 DCAF10Q5QP82 559 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 NEPROQ6NW34 567 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 CNSTQ6PJW8 725 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 CAND1Q86VP6 1230 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 CLEC1AQ8NC01 280 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 MCUQ8NE86 351 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 FKBP10Q96AY3 582 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 NACC2Q96BF6 587 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 ZNF285Q96NJ3 590 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 NAP1L3Q99457 506 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 CUTCQ9NTM9 273 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 P4HTMQ9NXG6 502 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 KLK4Q9Y5K2 254 aa16.87■□□□□ 0.29
PDLIM2-208ENST00000416159 FAM237BA0A1B0GVD1 139 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 CLEC18AA5D8T8 446 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 E5RI56 91 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 DSCR3O14972 297 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 VPS4BO75351 444 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 SORBS2O94875 1100 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 COILP38432 576 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 DHX34Q14147 1143 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 NAA25Q14CX7 972 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 CYP2A13Q16696 494 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 KCTD19Q17RG1 926 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 ANKRD20A4Q4UJ75 823 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 VWA5B1Q5TIE3 1220 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 ANKRD22Q5VYY1 191 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 TTC27Q6P3X3 843 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 CLEC18BQ6UXF7 455 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 CENPUQ71F23 418 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 OVCH1Q7RTY7 1134 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 CILP2Q8IUL8 1156 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 FAM26EQ8N5C1 309 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 CLEC18CQ8NCF0 446 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 GALNT11Q8NCW6 608 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 MIPEPQ99797 713 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 SELENOSQ9BQE4 189 aa16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 XAB2Q9HCS7 855 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-208ENST00000416159 SLC22A11Q9NSA0 550 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms